RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FAM111AQ96PZ2 611 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 SHCBP1LQ9BZQ2 653 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 PCDHGB6Q9Y5F9 930 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 OTOGQ6ZRI0 2925 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 A0A1W2PS29 197 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 HRKO00198 91 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 WWP2O00308 870 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 PGRMC2O15173 223 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 GUCY1B2O75343 617 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 OR2J2O76002 312 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 CRYABP02511 175 aaKnown RBP14.84□□□□□ -0.03
BRCA1-228ENST00000618469 SP1P08047 785 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 TRHRP34981 398 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-228ENST00000618469 HK2P52789 917 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 ERVK-8P63133 956 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 RNF4P78317 190 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 KRT71Q3SY84 523 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 SCIMPQ6UWF3 145 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 MMP21Q8N119 569 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 ASB15Q8WXK1 588 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 TMEM125Q96AQ2 219 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 FBXL20Q96IG2 436 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 SMC6Q96SB8 1091 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 SLC17A7Q9P2U7 560 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 MYOTQ9UBF9 498 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 ERVK-19Q9WJR5 959 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 YARS2Q9Y2Z4 477 aaKnown RBP14.84□□□□□ -0.03
BRCA1-228ENST00000618469 PLLPQ9Y342 182 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 ZGRF1Q86YA3 2104 aa14.84□□□□□ -0.03
BRCA1-228ENST00000618469 F8P00451 2351 aa14.83□□□□□ -0.03
BRCA1-228ENST00000618469 TMEM200CA6NKL6 621 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 H3BQF6 201 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 CDK2AP1O14519 115 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 PCDH7O60245 1069 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 NME2P1O60361 137 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 IGKV3-11P04433 115 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 NME2P22392 152 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ALDH9A1P49189 494 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 TDGF1P3P51864 188 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF844Q08AG5 666 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ACSM2AQ08AH3 577 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 BIKQ13323 160 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF267Q14586 743 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-228ENST00000618469 MAPKAPK3Q16644 382 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 SPRED3Q2MJR0 410 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 SPIN4Q56A73 249 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ACSM2BQ68CK6 577 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF324BQ6AW86 544 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-228ENST00000618469 SLC25A25Q6KCM7 469 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF227Q86WZ6 799 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 C9orf40Q8IXQ3 194 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 FAM98AQ8NCA5 519 aaKnown RBP14.83□□□□□ -0.04
BRCA1-228ENST00000618469 OR8K3Q8NH51 312 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 RIT1Q92963 219 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 APIPQ96GX9 242 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 SENP5Q96HI0 755 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-228ENST00000618469 RASL10BQ96S79 203 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 MECRQ9BV79 373 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 EBPLQ9BY08 206 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 TRIM45Q9H8W5 580 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-228ENST00000618469 TNFRSF12AQ9NP84 129 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 MCM8Q9UJA3 840 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 ERVK-11Q9UQG0 969 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 PCDHA9Q9Y5H5 950 aa14.83□□□□□ -0.04
BRCA1-228ENST00000618469 SVILO95425 2214 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 GNG14A0A1W2PPG7 69 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 C1orf226A1L170 272 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 A8MVJ9 347 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 LRRTM2O43300 516 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 TRIM13O60858 407 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 SLC35E2P0CK97 266 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 MST1P26927 711 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 TIA1P31483 386 aaKnown RBP eCLIP14.82□□□□□ -0.04
BRCA1-228ENST00000618469 SOX3P41225 446 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 BTKQ06187 659 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 ASPHQ12797 758 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 IMPG1Q17R60 797 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 C6orf163Q5TEZ5 329 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 SP5Q6BEB4 398 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-228ENST00000618469 CLEC6AQ6EIG7 209 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 RNF111Q6ZNA4 994 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 GALNT12Q8IXK2 581 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 OR4K14Q8NGD5 310 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 OR5L2Q8NGL0 311 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 DNAJB8Q8NHS0 232 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 TCP10LQ8TDR4 215 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 CHTF18Q8WVB6 975 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 KLHL29Q96CT2 875 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 FRMD6Q96NE9 622 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 GAL3ST4Q96RP7 486 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 TMEM109Q9BVC6 243 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 FAIM2Q9BWQ8 316 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 GATA5Q9BWX5 397 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-228ENST00000618469 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.82□□□□□ -0.04
BRCA1-228ENST00000618469 HPF1Q9NWY4 346 aa14.82□□□□□ -0.04
BRCA1-228ENST00000618469 KLF13Q9Y2Y9 288 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-228ENST00000618469 APCP25054 2843 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms