RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 GRHL3Q8TE85 626 aa15.54■□□□□ 0.08
CBWD3-211ENST00000615061 RIT1Q92963 219 aa15.54■□□□□ 0.08
CBWD3-211ENST00000615061 ZNF395Q9H8N7 513 aaPredicted RBP15.54■□□□□ 0.08
CBWD3-211ENST00000615061 KCNK9Q9NPC2 374 aa15.54■□□□□ 0.08
CBWD3-211ENST00000615061 LRFN1Q9P244 771 aa15.54■□□□□ 0.08
CBWD3-211ENST00000615061 ERVK-19Q9WJR5 959 aa15.54■□□□□ 0.08
CBWD3-211ENST00000615061 POLR3HQ9Y535 204 aaPredicted RBP15.54■□□□□ 0.08
CBWD3-211ENST00000615061 UTP20O75691 2785 aaKnown RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 ZNF354AO60765 605 aaPredicted RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 OR2J2O76002 312 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 CT62P0C5K7 136 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 GNLYP22749 145 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 FEN1P39748 380 aaKnown RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 TRA2BP62995 288 aaKnown RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 PMP22Q01453 160 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 BIKQ13323 160 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 MRPL49Q13405 166 aaKnown RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 UGT3A2Q3SY77 523 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 SH2D4BQ5SQS7 431 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 Q6ZSR9 355 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 NUDCD3Q8IVD9 361 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 C9orf40Q8IXQ3 194 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 SUN3Q8TAQ9 357 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 C16orf78Q8WTQ4 265 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 KLHL29Q96CT2 875 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 FBXL20Q96IG2 436 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 BARD1Q99728 777 aaKnown RBP15.53■□□□□ 0.08
CBWD3-211ENST00000615061 MYOTQ9UBF9 498 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 COPS7AQ9UBW8 275 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 ACTL7BQ9Y614 415 aa15.53■□□□□ 0.08
CBWD3-211ENST00000615061 GUCY1B2O75343 617 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 VPS4BO75351 444 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 LYPLA1O75608 230 aaPredicted RBP15.52■□□□□ 0.08
CBWD3-211ENST00000615061 RSL1D1O76021 490 aaKnown RBP15.52■□□□□ 0.08
CBWD3-211ENST00000615061 ANXA4P09525 319 aaPredicted RBP15.52■□□□□ 0.08
CBWD3-211ENST00000615061 LINC00032P0C843 101 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 MYZAPP0CAP1 466 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CPMP14384 443 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CYB561P49447 251 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 HK2P52789 917 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 KCNC4Q03721 635 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CASP8Q14790 479 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 SPRED3Q2MJR0 410 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 RPUSD3Q6P087 351 aaKnown RBP15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CROCCP2Q86T23 111 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CDC26Q8NHZ8 85 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 FAIM2Q9BWQ8 316 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 CXorf21Q9HAI6 301 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 ZDHHC2Q9UIJ5 367 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 VPS4AQ9UN37 437 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 TRAF6Q9Y4K3 522 aa15.52■□□□□ 0.08
CBWD3-211ENST00000615061 USP9YO00507 2555 aaPredicted RBP15.52■□□□□ 0.08
CBWD3-211ENST00000615061 FCHO1O14526 889 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 ITM2AO43736 263 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 CLPSP04118 112 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 FGF4P08620 206 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 DHRS4L1P0CG22 281 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 SSTR4P31391 388 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 TRHRP34981 398 aaPredicted RBP15.52■□□□□ 0.07
CBWD3-211ENST00000615061 KIAA0040Q15053 153 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 NR6A1Q15406 480 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 GALNTL5Q7Z4T8 443 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 ATCAYQ86WG3 371 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 TMEM156Q8N614 296 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 GALNT11Q8NCW6 608 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 TWIST2Q8WVJ9 160 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 CNRIP1Q96F85 164 aaPredicted RBP15.52■□□□□ 0.07
CBWD3-211ENST00000615061 RASL10BQ96S79 203 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 PELOQ9BRX2 385 aaKnown RBP15.52■□□□□ 0.07
CBWD3-211ENST00000615061 SIRT5Q9NXA8 310 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 UTS2RQ9UKP6 389 aa15.52■□□□□ 0.07
CBWD3-211ENST00000615061 NINQ8N4C6 2090 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 SETXQ7Z333 2677 aaKnown RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 ASH1LQ9NR48 2969 aaKnown RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 TM9SF1O15321 606 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 DYRK3O43781 588 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 SEC22BO75396 215 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 SLC25A12O75746 678 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 PORP16435 677 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 NT5EP21589 574 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 HLCSP50747 726 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 SLC37A1P57057 533 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 CHI3L2Q15782 390 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 NOXRED1Q6NXP6 359 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 MDGA2Q7Z553 956 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 GALNT12Q8IXK2 581 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 CLYBLQ8N0X4 340 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 ANKRD42Q8N9B4 389 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 C7orf57Q8NEG2 295 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 ADCY4Q8NFM4 1077 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 FAR1Q8WVX9 515 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 EXOSC8Q96B26 276 aaKnown RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 SCMH1Q96GD3 660 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 ZNF681Q96N22 645 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 TRIM45Q9H8W5 580 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 TMBIM4Q9HC24 238 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 EML4Q9HC35 981 aaKnown RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 GIMAP2Q9UG22 337 aa15.51■□□□□ 0.07
CBWD3-211ENST00000615061 YARS2Q9Y2Z4 477 aaKnown RBP15.51■□□□□ 0.07
CBWD3-211ENST00000615061 DNAJC13O75165 2243 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms