RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SLC36A3Q495N2 470 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TMEM35AQ53FP2 167 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TRMT12Q53H54 448 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 CCNJQ5T5M9 372 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 IKBIPQ70UQ0 350 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 LPCAT2Q7L5N7 544 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 GPR155Q7Z3F1 870 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TSEN54Q7Z6J9 526 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 PARP8Q8N3A8 854 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 METTL25Q8N6Q8 603 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 GOLM1Q8NBJ4 401 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TSPAN14Q8NG11 270 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR9Q2Q8NGE9 314 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 GOT1L1Q8NHS2 421 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 SUN3Q8TAQ9 357 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 GTPBP3Q969Y2 492 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 NMD3Q96D46 503 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 MTERF3Q96E29 417 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SHDQ96IW2 340 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SLC35G5Q96KT7 338 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DOHHQ9BU89 302 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NT5DC2Q9H857 520 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 AMBNQ9NP70 447 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 POT1Q9NUX5 634 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DDX18Q9NVP1 670 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 THUMPD1Q9NXG2 353 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 WNT16Q9UBV4 365 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CNOT11Q9UKZ1 510 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 MKLN1Q9UL63 735 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MYRFQ9Y2G1 1151 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ZNF780BQ9Y6R6 833 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NPIPA5A0A0B4J1W7 369 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KIR2DS5A0A0G2JLQ3 304 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 A0A0G2JNG1 304 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 A0A0J9YY10 115 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 A0A1W2PR77 199 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR5K3A6NET4 321 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CLDN24A6NM45 220 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NPIPA7E9PJI5 369 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KIR2DS3K7RE56 304 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 M0R3H8 397 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TNFRSF11BO00300 401 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PCDH17O14917 1159 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 AQP9O43315 295 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 B3GALT2O43825 422 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 XPNPEP2O43895 674 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 FCMRO60667 390 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MED26O95402 600 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 H6PDO95479 791 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CSF2P04141 144 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NPIPA8P0DM63 369 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NT5EP21589 574 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PPIBP23284 216 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 IGFBP5P24593 272 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 POU1F1P28069 291 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PPP2R1BP30154 601 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MPIP34949 423 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 BUD31P41223 144 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 ARHGDIAP52565 204 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 LIM2P55344 173 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 C21orf59P57076 290 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR1D5P58170 312 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 STARD6P59095 220 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RACK1P63244 317 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 IL5RAQ01344 420 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 VEZF1Q14119 521 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KIR2DS5Q14953 304 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SUZ12Q15022 739 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 EXOSC7Q15024 291 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 ELOCQ15369 112 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NEDD8Q15843 81 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NNATQ16517 81 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ADPRMQ3LIE5 342 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NADK2Q4G0N4 442 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 FGD3Q5JSP0 725 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 REEP3Q6NUK4 255 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SLC48A1Q6P1K1 146 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KLHL17Q6TDP4 642 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DCP2Q8IU60 420 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 LACC1Q8IV20 430 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MFSD2AQ8NA29 543 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SLC16A11Q8NCK7 471 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NUP43Q8NFH3 380 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 BPIFB6Q8NFQ5 453 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PJA1Q8NG27 643 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR5K1Q8NHB7 308 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 BAHD1Q8TBE0 780 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 CNIH3Q8TBE1 160 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RNF217Q8TC41 542 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 LZICQ8WZA0 190 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PEX11GQ96HA9 241 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 C7orf34Q96L11 122 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TREX2Q9BQ50 279 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 OSBPL10Q9BXB5 764 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ANKRD60Q9BZ19 345 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CCDC90BQ9GZT6 254 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 EPS8L2Q9H6S3 715 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 FAM118AQ9NWS6 357 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NDUFAF4Q9P032 175 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TMEM9Q9P0T7 183 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms