RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 JAZF1Q86VZ6 243 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZDHHC21Q8IVQ6 265 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 HS3ST5Q8IZT8 346 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNAAF3Q8N9W5 541 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATG16L2Q8NAA4 619 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 KREMEN2Q8NCW0 462 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PROKR2Q8NFJ6 384 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR11H4Q8NGC9 324 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR8D4Q8NGM9 314 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR150Q8NGU9 434 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 WDR36Q8NI36 951 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 GRAPLQ8TC17 118 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ELP5Q8TE02 316 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 NSMAFQ92636 917 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 EDAQ92838 391 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 EXTL1Q92935 676 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 NTAN1Q96AB6 310 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ULK4Q96C45 1275 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZBED6CLQ96FA7 236 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DIRAS2Q96HU8 199 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZBTB45Q96K62 511 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPL10LQ96L21 214 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRMT6Q96LA8 375 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 TEX37Q96LM6 180 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 C12orf42Q96LP6 360 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LINC00052Q96N35 136 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RBM14Q96PK6 669 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ERMAPQ96PL5 475 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC38A2Q96QD8 506 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FCRL5Q96RD9 977 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LGMNQ99538 433 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF251Q9BRH9 671 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SEC22CQ9BRL7 303 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 H2AFJQ9BTM1 129 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 TTPALQ9BTX7 342 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DPCDQ9BVM2 203 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SPATA5L1Q9BVQ7 753 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACTR6Q9GZN1 396 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MED28Q9H204 178 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR51M1Q9H341 326 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RIBC2Q9H4K1 309 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKRA2Q9H9E1 313 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC28A3Q9HAS3 691 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC25A19Q9HC21 320 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CAPN10Q9HC96 672 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 HHATLQ9HCP6 504 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABCB9Q9NP78 766 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MID1IP1Q9NPA3 183 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DDX4Q9NQI0 724 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRDM11Q9NQV5 511 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 POLE3Q9NRF9 147 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SDHAF3Q9NRP4 125 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPATCH2LQ9NWQ4 482 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 C1orf109Q9NX04 203 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MIOSQ9NXC5 875 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLCO1C1Q9NYB5 712 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF226Q9NYT6 803 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 NDOR1Q9UHB4 597 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PFDN2Q9UHV9 154 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPS6KA6Q9UK32 745 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 POMT2Q9UKY4 750 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SSR3Q9UNL2 185 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABCG2Q9UNQ0 655 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 WASF3Q9UPY6 502 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MRPS7Q9Y2R9 242 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LSM2Q9Y333 95 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC6A5Q9Y345 797 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 KIAA1217Q5T5P2 1943 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 COL5A3P25940 1745 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKRD36A6QL64 1941 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A1B0GW55 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A1B0GWJ7 208 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A1W2PQL4 384 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC12A8A0AV02 714 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLSCR5A0PG75 271 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PMS2P1A4D2B8 440 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARRDC5A6NEK1 342 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKDD1BA6NHY2 528 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARGFXA6NJG6 315 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 A8MUA0 341 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 D6RAR5 112 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC28A1O00337 649 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PPP6CO00743 305 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 GABRDO14764 452 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADAM12O43184 909 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SMAD6O43541 496 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC28A2O43868 658 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MSCO60682 206 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC19A2O60779 497 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLN5O75503 358 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SC5DO75845 299 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAD17O75943 681 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 IFNGP01579 166 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RB1P06400 928 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HEXAP06865 529 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FABP1P07148 127 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CNPP09543 421 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms