RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF750Q32MQ0 723 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CMPK2Q5EBM0 449 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 SLC29A4Q7RTT9 530 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 DOLPP1Q86YN1 238 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 DND1Q8IYX4 353 aaKnown RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 GBP7Q8N8V2 638 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 OR2M7Q8NG81 312 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 METTL6Q8TCB7 284 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 SLC22A8Q8TCC7 542 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CHTF18Q8WVB6 975 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TP53INP1Q96A56 240 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TM4SF18Q96CE8 201 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CCDC120Q96HB5 630 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TMEM237Q96Q45 408 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TEX10Q9NXF1 929 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TBK1Q9UHD2 729 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CES1P1Q9UKY3 287 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 PSME2Q9UL46 239 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 KLF2Q9Y5W3 355 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CRYBG3Q68DQ2 2970 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 NAV2Q8IVL1 2488 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 ICE1Q9Y2F5 2266 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SERTM1A2A2V5 107 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CCDC151A5D8V7 595 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PRRG2O14669 202 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 HS6ST1O60243 411 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GLRA3O75311 464 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GLSO94925 669 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 NADKO95544 446 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ESRRBO95718 433 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CLPSP04118 112 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SHBGP04278 402 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ENO1P06733 434 aaKnown RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ESRRAP11474 423 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PORP16435 677 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ABOP16442 354 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SERPINB3P29508 390 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PTGER1P34995 402 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CRHR1P34998 444 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 DCTP40126 519 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GPR85P60893 370 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PPIAP62937 165 aaKnown RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ERVK-8P63133 956 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 FUT7Q11130 342 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CSTF3Q12996 717 aaKnown RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 LCP2Q13094 533 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 HYAL4Q2M3T9 481 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CCDC153Q494R4 210 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SLC22A10Q63ZE4 541 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SP5Q6BEB4 398 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SLC48A1Q6P1K1 146 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PAOXQ6QHF9 649 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 RNF111Q6ZNA4 994 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GK5Q6ZS86 529 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GPRIN3Q6ZVF9 776 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 FGD2Q7Z6J4 655 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 MRGPRGQ86SM5 289 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GSPT2Q8IYD1 628 aaKnown RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF808Q8N4W9 903 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CDYL2Q8N8U2 506 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CNPPD1Q9BV87 410 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 WWTR1Q9GZV5 400 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SH2D2AQ9NP31 389 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 SACM1LQ9NTJ5 587 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 TINAGQ9UJW2 476 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 EMCNQ9ULC0 261 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 GRID1Q9ULK0 1009 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 ERVK-19Q9WJR5 959 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 MEMO1Q9Y316 297 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 PCDHA9Q9Y5H5 950 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 CENPEQ02224 2701 aa9.72□□□□□ -0.85
CCDC9-203ENST00000596938 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.85
CCDC9-203ENST00000596938 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 C2orf92A0A1B0GVN3 265 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PINLYPA6NC86 204 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 GOLGA6L10A6NI86 522 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 E9PLN8 166 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 G3V2L1 256 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 H3BQF6 201 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PROCP04070 461 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 P04436 131 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 MYL2P10916 166 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 CPMP14384 443 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 KRT15P19012 456 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 S1PR1P21453 382 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PTGS2P35354 604 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 RFC3P40938 356 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 SMSP52788 366 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 DNAJB13P59910 316 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 HSF1Q00613 529 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 FOXO1Q12778 655 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 MAP4K2Q12851 820 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 EBPQ15125 230 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms