RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 FAM162AQ96A26 154 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 PKP2Q99959 881 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 DPH2Q9BQC3 489 aaPredicted RBP14.28□□□□□ -0.12
VRK3-207ENST00000594092 CHST8Q9H2A9 424 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 RIMS3Q9UJD0 308 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 OTOGLQ3ZCN5 2332 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 SCN2AQ99250 2005 aa14.28□□□□□ -0.12
VRK3-207ENST00000594092 AGRPO00253 132 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.12
VRK3-207ENST00000594092 FGF17O60258 216 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 CBFA2T3O75081 653 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 LDB3O75112 727 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 KCNK5O95279 499 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 KRT75O95678 551 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 ID2Q02363 134 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 FOLH1Q04609 750 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 CSRP2Q16527 193 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 COX20Q5RI15 118 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 SAXO2Q658L1 398 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 CPZQ66K79 652 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 B3GNT8Q7Z7M8 397 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 LILRA2Q8N149 483 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 LRRC25Q8N386 305 aaPredicted RBP14.27□□□□□ -0.12
VRK3-207ENST00000594092 NCLNQ969V3 563 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 NEURL3Q96EH8 262 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 MVB12AQ96EY5 273 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 PEX11GQ96HA9 241 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 NDC1Q9BTX1 674 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 SIDT1Q9NXL6 827 aaKnown RBP14.27□□□□□ -0.12
VRK3-207ENST00000594092 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.12
VRK3-207ENST00000594092 NDOR1Q9UHB4 597 aa14.27□□□□□ -0.12
VRK3-207ENST00000594092 B4GALT2O60909 372 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 GPR75O95800 540 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 ALAS2P22557 587 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 PEX2P28328 305 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 CCT3P49368 545 aaKnown RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 ARSFP54793 590 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 CASP9P55211 416 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 ZFP36L1Q07352 338 aaKnown RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 TRA2AQ13595 282 aaKnown RBP eCLIP14.27□□□□□ -0.13
VRK3-207ENST00000594092 ADRM1Q16186 407 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 SPDYE7PQ495Y7 208 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 YOD1Q5VVQ6 348 aaPredicted RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 LPCAT4Q643R3 524 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 RNF130Q86XS8 419 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 PTOV1Q86YD1 416 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 ZZZ3Q8IYH5 903 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 OR52E4Q8NGH9 312 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 OR9A2Q8NGT5 310 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 ADAMTS18Q8TE60 1221 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 DNAJC9Q8WXX5 260 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 POP5Q969H6 163 aaKnown RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 PPWD1Q96BP3 646 aaKnown RBP14.27□□□□□ -0.13
VRK3-207ENST00000594092 OR6C1Q96RD1 312 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 KLHL4Q9C0H6 718 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 RAD21L1Q9H4I0 556 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 PARD6AQ9NPB6 346 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 MAP4K5Q9Y4K4 846 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 MAU2Q9Y6X3 613 aa14.27□□□□□ -0.13
VRK3-207ENST00000594092 DSCR3O14972 297 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 HYAL3O43820 417 aaPredicted RBP14.26□□□□□ -0.13
VRK3-207ENST00000594092 CREG1O75629 220 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 NUDT7P0C024 238 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 ETFAP13804 333 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 CPMP14384 443 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 PORP16435 677 aaPredicted RBP14.26□□□□□ -0.13
VRK3-207ENST00000594092 CRATP43155 626 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 OR1D4P47884 311 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 VAC14Q08AM6 782 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 FADDQ13158 208 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 LRRC36Q1X8D7 754 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 VMACQ2NL98 169 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 OGFRL1Q5TC84 451 aaPredicted RBP14.26□□□□□ -0.13
VRK3-207ENST00000594092 TMEM107Q6UX40 140 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 TMEM64Q6YI46 380 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 C6orf120Q7Z4R8 191 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 CATSPER1Q8NEC5 780 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 OR51Q1Q8NH59 317 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 LRTOMTQ8WZ04 291 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 SEMA3GQ9NS98 782 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 NCDNQ9UBB6 729 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 RAPGEFL1Q9UHV5 662 aa14.26□□□□□ -0.13
VRK3-207ENST00000594092 MYOCOSA0A1B0GUC4 107 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 C4orf47A7E2U8 309 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 SEC16AO15027 2179 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 LRP3O75074 770 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 TNFRSF21O75509 655 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 TIPRLO75663 272 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 FCGR1AP12314 374 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 PDX1P52945 283 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 C16orf72Q14CZ0 275 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 LTB4RQ15722 352 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 GRAMD1BQ3KR37 738 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 WLSQ5T9L3 541 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 ERMP1Q7Z2K6 904 aa14.25□□□□□ -0.13
VRK3-207ENST00000594092 ZNF595Q8IYB9 648 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms