RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MYLK4Q86YV6 388 aaPredicted RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 RELL1Q8IUW5 271 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 TAGAPQ8N103 731 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 LRRC25Q8N386 305 aaPredicted RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 WDR20Q8TBZ3 569 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 RIT1Q92963 219 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 SECISBP2Q96T21 854 aaKnown RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 TSPYL1Q9H0U9 437 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 LDAHQ9H6V9 325 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 IPPKQ9H8X2 491 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 TNFRSF10DQ9UBN6 386 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 ACAD8Q9UKU7 415 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 ANKRD17O75179 2603 aaKnown RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 HCFC1P51610 2035 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 A0A096LPK6 155 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 ATP6AP2A0A1C7CYW4 349 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 HMX2A2RU54 273 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 OR10H2O60403 315 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 SH3BGRLO75368 114 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 ATP6AP2O75787 350 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 CLDN9O95484 217 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 FAM58BPP0C7Q3 252 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 NR2F6P10588 404 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 TYK2P29597 1187 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 SERPINB8P50452 374 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 KCNJ2P63252 427 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 NTRK2Q16620 822 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 SLC25A35Q3KQZ1 300 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 CES4AQ5XG92 561 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 ZNF585AQ6P3V2 769 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 RPRMLQ8N4K4 120 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 C17orf47Q8NEP4 570 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 PPWD1Q96BP3 646 aaKnown RBP17.38■□□□□ 0.37
CCDC43-205ENST00000592333 GPR78Q96P69 363 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 SERPINI1Q99574 410 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 NTMT1Q9BV86 223 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 SORBS1Q9BX66 1292 aaKnown RBP17.38■□□□□ 0.37
CCDC43-205ENST00000592333 FUT8Q9BYC5 575 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 WWTR1Q9GZV5 400 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 ZNF703Q9H7S9 590 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-205ENST00000592333 B4GALT7Q9UBV7 327 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 ADAM29Q9UKF5 820 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 FAM215AQ9Y5M1 114 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 CHCHD2Q9Y6H1 151 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-205ENST00000592333 F8P00451 2351 aa17.38■□□□□ 0.37
CCDC43-205ENST00000592333 A0A1W2PR48 441 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 NKX2-6A6NCS4 301 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 FAM90A27PA6NNH2 459 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 G3V3Y1 287 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 TP53I11O14683 189 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 RBP1P09455 135 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 GLI4P10075 376 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 GMPRP36959 345 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 PIGAP37287 484 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 KRTAP10-9P60411 292 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 HERVK_113P63132 956 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 ERVK-8P63133 956 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 EBPQ15125 230 aaKnown RBP17.37■□□□□ 0.37
CCDC43-205ENST00000592333 CPSF6Q16630 551 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC43-205ENST00000592333 RIPPLY2Q5TAB7 128 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 RTL6Q6ICC9 239 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 OR52E8Q6IFG1 317 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 DGAT2L6Q6ZPD8 337 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 GOLGA7Q7Z5G4 137 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 CCDC71Q8IV32 467 aaPredicted RBP17.37■□□□□ 0.37
CCDC43-205ENST00000592333 OR5M9Q8NGP3 310 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 OR10Q1Q8NGQ4 319 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 CNPPD1Q9BV87 410 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 ERVK-6Q9BXR3 956 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 UCK2Q9BZX2 261 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 ACSS3Q9H6R3 686 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 AHSPQ9NZD4 102 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 ERVK-19Q9WJR5 959 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 LIPGQ9Y5X9 500 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 CELSR1Q9NYQ6 3014 aa17.37■□□□□ 0.37
CCDC43-205ENST00000592333 STX16-NPEPL1H3BU86 382 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 STX16O14662 325 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 TMPRSS11DO60235 418 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 CDH16O75309 829 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 EEDO75530 441 aaKnown RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ALDOAP04075 364 aaKnown RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 TMED10P49755 219 aaKnown RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 NR0B1P51843 470 aaKnown RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 IRF9Q00978 393 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ZNF267Q14586 743 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 SF3B4Q15427 424 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 TRADDQ15628 312 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 C1orf185Q5T7R7 199 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ZNF441Q8N8Z8 693 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 TRPC4APQ8TEL6 797 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ISL2Q96A47 359 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ZNF559Q9BR84 538 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 EXO5Q9H790 373 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 CXorf21Q9HAI6 301 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 SEMA4BQ9NPR2 832 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-205ENST00000592333 ZDHHC18Q9NUE0 388 aa17.36■□□□□ 0.37
CCDC43-205ENST00000592333 HIVEP1P15822 2718 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 AHRRA9YTQ3 701 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms