RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ACOT7O00154 380 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 HRKO00198 91 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PGRMC2O15173 223 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ENO1P06733 434 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ESRRAP11474 423 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 RFC3P40938 356 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PKNOX1P55347 436 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SLC37A1P57057 533 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 GALNT1Q10472 559 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 TBL3Q12788 808 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ASPHQ12797 758 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF267Q14586 743 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 TDRPQ86YL5 185 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 GALNT12Q8IXK2 581 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF808Q8N4W9 903 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CDYL2Q8N8U2 506 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 OR2M7Q8NG81 312 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 OR4K14Q8NGD5 310 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SREK1Q8WXA9 508 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 DEPPQ9NTK1 212 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 VPS29Q9UBQ0 182 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 TINAGQ9UJW2 476 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CENPEQ02224 2701 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 GOLGA6L10A6NI86 522 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 WASHC1A8K0Z3 465 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 MANBAO00462 879 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PRRG2O14669 202 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 HS6ST1O60243 411 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF354AO60765 605 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ULK1O75385 1050 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CNR1P21554 472 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 HMOX2P30519 316 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PTGER1P34995 402 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 DCTP40126 519 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 TRA2BP62995 288 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 ART3Q13508 389 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 EBPQ15125 230 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 CHERPQ8IWX8 916 aaKnown RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 METTL6Q8TCB7 284 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 SPACA9Q96E40 222 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 GAL3ST4Q96RP7 486 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 FAM173AQ9BQD7 235 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 WWTR1Q9GZV5 400 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
DDX39A-208ENST00000588692 KLF2Q9Y5W3 355 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-208ENST00000588692 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-208ENST00000588692 H3BQF6 201 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-208ENST00000588692 ESRRBO95718 433 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 SHBGP04278 402 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 P04436 131 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 MYL2P10916 166 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 CPMP14384 443 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 KRT15P19012 456 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 AGAP20933 346 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 COL8A1P27658 744 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 CCT5P48643 541 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 XKP51811 444 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 SMSP52788 366 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 HSF1Q00613 529 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 PLGLB1Q02325 96 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 FUT7Q11130 342 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF750Q32MQ0 723 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF791Q3KP31 576 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-208ENST00000588692 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 ARHGAP11AQ6P4F7 1023 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 PAOXQ6QHF9 649 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 FAM47EQ6ZV65 393 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 MRGPRGQ86SM5 289 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 SLC22A16Q86VW1 577 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 C1orf52Q8N6N3 182 aaKnown RBP13.35□□□□□ -0.27
DDX39A-208ENST00000588692 PHF10Q8WUB8 498 aaKnown RBP13.35□□□□□ -0.27
DDX39A-208ENST00000588692 HBEGFQ99075 208 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 FAIM2Q9BWQ8 316 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 EMCNQ9ULC0 261 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 MEMO1Q9Y316 297 aa13.35□□□□□ -0.27
DDX39A-208ENST00000588692 EML6Q6ZMW3 1958 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 CRYBG3Q68DQ2 2970 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 A0A1W2PPM1 405 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 CDH16O75309 829 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 CLPSP04118 112 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 FBXO45P0C2W1 286 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 CCL3P10147 92 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 PORP16435 677 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-208ENST00000588692 SERPINB3P29508 390 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 PTGS2P35354 604 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 PPIAP62937 165 aaKnown RBP13.34□□□□□ -0.27
DDX39A-208ENST00000588692 SPIN4Q56A73 249 aa13.34□□□□□ -0.27
DDX39A-208ENST00000588692 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms