RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SHBGP04278 402 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 HMOX2P30519 316 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 DCTP40126 519 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 SLCO1A2P46721 670 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 KRT6CP48668 564 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 TCHHL1Q5QJ38 904 aaPredicted RBP16.37■□□□□ 0.21
TPM4-206ENST00000587201 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 MRGPRGQ86SM5 289 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 GOLM1Q8NBJ4 401 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 OR2M7Q8NG81 312 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 ITLN2Q8WWU7 325 aaPredicted RBP16.37■□□□□ 0.21
TPM4-206ENST00000587201 SGCZQ96LD1 299 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 ZNF382Q96SR6 550 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 STK38LQ9Y2H1 464 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 MAST4O15021 2626 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 MYO7BQ6PIF6 2116 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 NAV2Q8IVL1 2488 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 PINLYPA6NC86 204 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 SMIM23A6NLE4 172 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 OR6C76A6NM76 312 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 FOXO6A8MYZ6 492 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 ACOT7O00154 380 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 GLRA3O75311 464 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 P04436 131 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 KRT15P19012 456 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 CNR1P21554 472 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 XKP51811 444 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 SLC37A1P57057 533 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 PPIAP62937 165 aaKnown RBP16.36■□□□□ 0.21
TPM4-206ENST00000587201 GALNT1Q10472 559 aaPredicted RBP16.36■□□□□ 0.21
TPM4-206ENST00000587201 TBL3Q12788 808 aaKnown RBP16.36■□□□□ 0.21
TPM4-206ENST00000587201 CMPK2Q5EBM0 449 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 C6orf163Q5TEZ5 329 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 RPTNQ6XPR3 784 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 FAM47EQ6ZV65 393 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 GALNT12Q8IXK2 581 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 SLC15A4Q8N697 577 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 OR52N2Q8NGI0 321 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 L3HYPDHQ96EM0 354 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 CXorf21Q9HAI6 301 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 SACM1LQ9NTJ5 587 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 VPS29Q9UBQ0 182 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
TPM4-206ENST00000587201 A0A0G2JMM0 328 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 A0A1B0GTH9 108 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 A0A1W2PPB8 328 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 A0A1W2PRS3 328 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 C1orf226A1L170 272 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 FAM166BA8MTA8 275 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 KIR3DP1A8MWS1 328 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 PRSS44E7EML9 344 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 PRRG2O14669 202 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 ULK1O75385 1050 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 HSD3B1P14060 373 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 NT5EP21589 574 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 HSD3B2P26439 372 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 PTGS2P35354 604 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 CSTF3Q12996 717 aaKnown RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 LCP2Q13094 533 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 EBPQ15125 230 aaKnown RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 GK5Q6ZS86 529 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 CHERPQ8IWX8 916 aaKnown RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 ZNF808Q8N4W9 903 aaPredicted RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 C1orf52Q8N6N3 182 aaKnown RBP16.35■□□□□ 0.21
TPM4-206ENST00000587201 CCNYL1Q8N7R7 359 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 AGAP11Q8TF27 550 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 TM4SF18Q96CE8 201 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 FAM173AQ9BQD7 235 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 WWTR1Q9GZV5 400 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 DEFB127Q9H1M4 99 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 PPCSQ9HAB8 311 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 EMCNQ9ULC0 261 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 MEMO1Q9Y316 297 aa16.35■□□□□ 0.21
TPM4-206ENST00000587201 ERAL1O75616 437 aaKnown RBP16.34■□□□□ 0.21
TPM4-206ENST00000587201 PDE9AO76083 593 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 NADKO95544 446 aaPredicted RBP16.34■□□□□ 0.21
TPM4-206ENST00000587201 CT62P0C5K7 136 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 CCL3P10147 92 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 MYL2P10916 166 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 CPMP14384 443 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 PORP16435 677 aaPredicted RBP16.34■□□□□ 0.21
TPM4-206ENST00000587201 SSTR4P31391 388 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 CCT5P48643 541 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 SMSP52788 366 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 PKNOX1P55347 436 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 ADORA2A-AS1P86434 159 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 SLC48A1Q6P1K1 146 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 RGS9BPQ6ZS82 235 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 FGD2Q7Z6J4 655 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 SLC22A16Q86VW1 577 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 TDRPQ86YL5 185 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 DOLPP1Q86YN1 238 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■■ 56.2
TPM4-206ENST00000587201 SPACA9Q96E40 222 aaPredicted RBP16.34■□□□□ 0.21
TPM4-206ENST00000587201 CCDC126Q96EE4 140 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
TPM4-206ENST00000587201 FAIM2Q9BWQ8 316 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms