RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	WIF1	Q9Y5W5	379 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CSPG4	Q6UVK1	2322 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GOLGA6L10	A0A0M3HER8	536 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C2orf72	A6NCS6	295 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR14I1	A6ND48	311 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM187A	A6NFU0	413 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANKDD1B	A6NHY2	528 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A8MVJ9	347 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KLRC4-KLRK1	H3BQV0	150 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PSMD12	O00232	456 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FCHO1	O14526	889 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PRRG2	O14669	202 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EIF3H	O15372	352 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SUSD5	O60279	629 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPR75	O95800	540 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IFNA16	P05015	189 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ABCB1	P08183	1280 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LTA4H	P09960	611 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM58BP	P0C7Q3	252 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STMN1	P16949	149 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TSPAN8	P19075	237 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPX3	P22352	226 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPN2	P22792	545 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GSTM2	P28161	218 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LOX	P28300	417 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PTPN6	P29350	595 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCKAR	P32238	428 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PIK3CB	P42338	1070 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRPC1	P48995	793 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EMD	P50402	254 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HTR6	P50406	440 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NAGLU	P54802	743 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GAS1	P54826	345 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLTP	P55058	493 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RIPPLY3	P57055	190 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	B3GALT5-AS1	P59052	145 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IRF8	Q02556	426 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF267	Q14586	743 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EXOSC7	Q15024	291 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LTB4R	Q15722	352 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PFKFB4	Q16877	469 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBXL19-AS1	Q494R0	122 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACSF3	Q4G176	576 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM35A	Q53FP2	167 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EIPR1	Q53HC9	387 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GRTP1	Q5TC63	336 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MROH9	Q5TGP6	573 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	VASN	Q6EMK4	673 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NIPAL1	Q6NVV3	410 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LETMD1	Q6P1Q0	360 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MED27	Q6P2C8	311 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF585A	Q6P3V2	769 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRIM40	Q6P9F5	258 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NPSR1	Q6W5P4	371 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SH2D5	Q6ZV89	423 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPR180	Q86V85	440 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPALPP1	Q8IXQ4	340 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PRR22	Q8IZ63	422 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KRT78	Q8N1N4	520 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TCAIM	Q8N3R3	496 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM132C	Q8N3T6	1108 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBXW8	Q8N3Y1	598 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM156	Q8N614	296 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HORMAD2	Q8N7B1	307 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WDSUB1	Q8N9V3	476 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C9orf106	Q8NAJ2	232 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LRRN4CL	Q8ND94	238 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TTL	Q8NG68	377 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RHEBL1	Q8TAI7	183 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NEIL3	Q8TAT5	605 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SPPL2A	Q8TCT8	520 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CA5BP1	Q8WTZ4	195 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PYROXD1	Q8WU10	500 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MZB1	Q8WU39	189 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DCAKD	Q8WVC6	231 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC44A1	Q8WWI5	657 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ASB15	Q8WXK1	588 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM125	Q96AQ2	219 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF524	Q96C55	264 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TM4SF18	Q96CE8	201 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CNRIP1	Q96F85	164 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WDYHV1	Q96HA8	205 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MARK4	Q96L34	752 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GNRHR2	Q96P88	292 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NODAL	Q96S42	347 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NPAS1	Q99742	590 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SMR3A	Q99954	134 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANGPTL4	Q9BY76	406 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MRPL1	Q9BYD6	325 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PHACTR1	Q9C0D0	580 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NXF5	Q9H1B4	397 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RPF2	Q9H7B2	306 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLEKHF2	Q9H8W4	249 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZFP64	Q9NPA5	681 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACKR4	Q9NPB9	350 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SNX15	Q9NRS6	342 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HPF1	Q9NWY4	346 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NUDT4	Q9NZJ9	180 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MAT2B	Q9NZL9	334 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms