RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HMOX2P30519 316 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 PTGER1P34995 402 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 RAP1GDS1P52306 607 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 DUSP2Q05923 314 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 RCN2Q14257 317 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 NSDHLQ15738 373 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CHI3L2Q15782 390 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 PRSS53Q2L4Q9 553 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF750Q32MQ0 723 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 TUBB8Q3ZCM7 444 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 SFT2D3Q587I9 215 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CFAP157Q5JU67 520 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CPEB2Q7Z5Q1 589 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 GALNT16Q8N428 558 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 KIF2BQ8N4N8 673 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF321PQ8N8H1 164 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 NFAM1Q8NET5 270 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 MGARPQ8TDB4 240 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 DOK4Q8TEW6 326 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CHTF18Q8WVB6 975 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 C3orf30Q96M34 536 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 PTCHD1Q96NR3 888 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 SORT1Q99523 831 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 SERPINI1Q99574 410 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 NPAS2Q99743 824 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF552Q9H707 407 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 COPS7BQ9H9Q2 264 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 BRF2Q9HAW0 419 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CLK4Q9HAZ1 481 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 LYRM4Q9HD34 91 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 C5AR2Q9P296 337 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF223Q9UK11 482 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 SNX6Q9UNH7 406 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 DNAJC15Q9Y5T4 150 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 MED13Q9UHV7 2174 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 TNRC6AQ8NDV7 1962 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 HRKO00198 91 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PEX12O00623 359 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 AZIN1O14977 448 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PGRMC2O15173 223 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 TM9SF1O15321 606 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 ULK1O75385 1050 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 ZWINTO95229 277 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 HPP00738 406 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 IGHEP01854 428 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 KRT6AP02538 564 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 KRT6BP04259 564 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PRR35P0CG20 571 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 CPN2P22792 545 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 TSFMP43897 325 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 KRT6CP48668 564 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 SOX8P57073 446 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 TNFRSF17Q02223 184 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 BTKQ06187 659 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 CSTF3Q12996 717 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 KIAA0040Q15053 153 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 SH2D4BQ5SQS7 431 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 AGBL2Q5U5Z8 902 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 NIPAL1Q6NVV3 410 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 FAM180BQ6P0A1 224 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PAPD4Q6PIY7 484 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 Q6ZSR9 355 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 NDUFAF7Q7L592 441 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 GPR180Q86V85 440 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 NUDT13Q86X67 352 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PTRH1Q86Y79 214 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 NUDCD3Q8IVD9 361 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF781Q8N8C0 355 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 SRFBP1Q8NEF9 429 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 NACC2Q96BF6 587 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 THOC3Q96J01 351 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 CNDP1Q96KN2 507 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 EBPLQ9BY08 206 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 PRTFDC1Q9NRG1 225 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 GPR83Q9NYM4 423 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 HEY2Q9UBP5 337 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 VPS29Q9UBQ0 182 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 MID2Q9UJV3 735 aa8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 EXO1Q9UQ84 846 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 GCN1Q92616 2671 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF462Q96JM2 2506 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 UQCRHLA0A096LP55 91 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 NSG1A0A0A6YYJ2 146 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 PSMD12O00232 456 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 PIP5K1BO14986 540 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 BIRC5O15392 142 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 PRKNO60260 465 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 CTNSO60931 367 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 UQCRHP07919 91 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 FGF4P08620 206 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 LINC00032P0C843 101 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 UROSP10746 265 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 IL10P22301 178 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 JAK1P23458 1154 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 TACR1P25103 407 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 ITGA3P26006 1051 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms