RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SMSP52788 366 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 WNT4P56705 351 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 PPP3R1P63098 170 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 CD83Q01151 205 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 HYAL2Q12891 473 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 HSPB3Q12988 150 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 GLYR1Q49A26 553 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-207ENST00000572253 C3orf38Q5JPI3 329 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 PRAMEF14Q5SWL7 426 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 PRAMEF13Q5VWM6 474 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 DPPA4Q7L190 304 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 C6orf120Q7Z4R8 191 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 VN1R5Q7Z5H4 357 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 CACTIN-AS1Q8N1I8 211 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 OR52I1Q8NGK6 324 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 ZBED6CLQ96FA7 236 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-207ENST00000572253 LMLNQ96KR4 655 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 LRR1Q96L50 414 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 RIPOR3Q96MK2 946 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 ADAM30Q9UKF2 790 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 B4DXG7 233 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ANHXE9PGG2 379 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 PLD2O14939 933 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 POLR1CO15160 346 aaPredicted RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ALX3O95076 343 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 CSF2P04141 144 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 NR2F1P10589 423 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ERP29P30040 261 aaKnown RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 MAP2K3P46734 347 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 KCNJ5P48544 419 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 PLK5Q496M5 336 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 SLC9B2Q86UD5 537 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 IQCF1Q8N6M8 205 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 GPR32P1Q8NGA4 272 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 RAET1EQ8TD07 263 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 VOPP1Q96AW1 172 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 TRMT61AQ96FX7 289 aaKnown RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 MED18Q9BUE0 208 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 P2RX2Q9UBL9 471 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 TRPC4Q9UBN4 977 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 SH2B3Q9UQQ2 575 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 A0A1W2PRU2 124 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 HEPACAM2A8MVW5 462 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 CHRM5P08912 532 aaPredicted RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 SLC2A2P11168 524 aaPredicted RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 GSTM3P21266 225 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ANXA11P50995 505 aaKnown RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 TAP2Q03519 686 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 PAQR6Q6TCH4 344 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF438Q7Z4V0 828 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 BCDIN3DQ7Z5W3 292 aaKnown RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 TRIM48Q8IWZ4 208 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 SMPDL3AQ92484 453 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 SCLYQ96I15 445 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 DHRS1Q96LJ7 313 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 ZIC5Q96T25 663 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 TEX12Q9BXU0 123 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 EPHX3Q9H6B9 360 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 EXOSC1Q9Y3B2 195 aaKnown RBP10.21□□□□□ -0.78
CCDC40-207ENST00000572253 MAU2Q9Y6X3 613 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 NINQ8N4C6 2090 aa10.21□□□□□ -0.78
CCDC40-207ENST00000572253 OR6C70A6NIJ9 312 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 STK25O00506 426 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 CASKO14936 926 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TRIM3O75382 744 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-207ENST00000572253 ALPPP05187 535 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 GJA1P17302 382 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 IFNGR2P38484 337 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TGM4P49221 684 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TCTN1Q2MV58 587 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 MZT2AQ6P582 158 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 DEFB128Q7Z7B8 93 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 NRSN1Q8IZ57 195 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TEX47Q8TBZ9 253 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SLC38A2Q96QD8 506 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
CCDC40-207ENST00000572253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC40-207ENST00000572253 IL36AQ9UHA7 158 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 CCDC88CQ9P219 2028 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 PRKYO43930 277 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 RECKO95980 971 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 RB1P06400 928 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 HLA-DMAP28067 261 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TM4SF4P48230 202 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 POM121L1PQ3SYA9 428 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SYT14P1Q58G82 188 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SLC36A4Q6YBV0 504 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 TECPR1Q7Z6L1 1165 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SLC39A11Q8N1S5 342 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 CELF5Q8N6W0 485 aaKnown RBP10.2□□□□□ -0.78
CCDC40-207ENST00000572253 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 SMG9Q9H0W8 520 aaKnown RBP10.2□□□□□ -0.78
CCDC40-207ENST00000572253 OR2AG1Q9H205 316 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 MIXL1Q9H2W2 232 aa10.2□□□□□ -0.78
CCDC40-207ENST00000572253 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms