RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 FAM180BQ6P0A1 224 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 OPN5Q6U736 354 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZYG11AQ6WRX3 759 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 RTL4Q6ZR62 310 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SH2D5Q6ZV89 423 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SLC29A4Q7RTT9 530 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SPPL2CQ8IUH8 684 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 POGLUT1Q8NBL1 392 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 NUBPLQ8TB37 319 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCDC120Q96HB5 630 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 GSTO2Q9H4Y5 243 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 NMRK1Q9NWW6 199 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 VPS29Q9UBQ0 182 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SUCOQ9UBS9 1254 aaKnown RBP16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 UBFD1O14562 309 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ULK1O75385 1050 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ERAL1O75616 437 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ESRRBO95718 433 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 CLPSP04118 112 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCL3P10147 92 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ESRRAP11474 423 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 KRT4P19013 534 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 FEN1P39748 380 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 NR0B1P51843 470 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 BTKQ06187 659 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZNF787Q6DD87 383 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 C3P1Q6ZMU1 363 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 NCCRP1Q6ZVX7 275 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 TDRPQ86YL5 185 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 GALNT12Q8IXK2 581 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZFP62Q8NB50 900 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR2M7Q8NG81 312 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR52N2Q8NGI0 321 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 SLC22A8Q8TCC7 542 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 TM4SF18Q96CE8 201 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 SHCBP1LQ9BZQ2 653 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 WWTR1Q9GZV5 400 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 DEFB127Q9H1M4 99 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 PCDHA9Q9Y5H5 950 aa16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-207ENST00000572043 HECTD1Q9ULT8 2610 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 A0A1B0GTH9 108 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 COPEO14579 308 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 PLIN3O60664 434 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 GUCY1B2O75343 617 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 NADKO95544 446 aaPredicted RBP16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CPMP14384 443 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCT5P48643 541 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 DNASE1L1P49184 302 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 NAGLUP54802 743 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 FOXA1P55317 472 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 PKNOX1P55347 436 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 SLC37A1P57057 533 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CSTF3Q12996 717 aaKnown RBP16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 EBPQ15125 230 aaKnown RBP16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 MPEG1Q2M385 716 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CMPK2Q5EBM0 449 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 SLC48A1Q6P1K1 146 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 TMEM64Q6YI46 380 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 FGD2Q7Z6J4 655 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR5M3Q8NGP4 307 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 C16orf52Q8NHV5 167 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 AGAP11Q8TF27 550 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CHTF18Q8WVB6 975 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 APIPQ96GX9 242 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 EBPLQ9BY08 206 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 BRINP2Q9C0B6 783 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 PPCSQ9HAB8 311 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 CXorf21Q9HAI6 301 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 SACM1LQ9NTJ5 587 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 GRID1Q9ULK0 1009 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 STK38LQ9Y2H1 464 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZNF835Q9Y2P0 537 aa16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 FLNBO75369 2602 aaKnown RBP16.43■□□□□ 0.22
CTDNEP1-207ENST00000572043 C1orf226A1L170 272 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PCDH7O60245 1069 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CDH16O75309 829 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CRCPO75575 148 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 LRATO95237 230 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 P04436 131 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 ENO1P06733 434 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 HSD3B1P14060 373 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PORP16435 677 aaPredicted RBP16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CNR1P21554 472 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 HSD3B2P26439 372 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CRHR1P34998 444 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PIGAP37287 484 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PPIAP62937 165 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCDC153Q494R4 210 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CFAP157Q5JU67 520 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 C6orf163Q5TEZ5 329 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PRAMEF20Q5VT98 475 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms