RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FOXR1Q6PIV2 292 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 VITQ6UXI7 678 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SERPINA13PQ6UXR4 307 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PLEKHG7Q6ZR37 379 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF551Q7Z340 670 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 SLC46A3Q7Z3Q1 461 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PIGWQ7Z7B1 504 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF554Q86TJ5 538 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 C12orf40Q86WS4 652 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZFAND4Q86XD8 727 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 RBM45Q8IUH3 476 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 UBQLNLQ8IYU4 475 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ENTHD1Q8IYW4 607 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF683Q8IZ20 524 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF567Q8N184 647 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF786Q8N393 782 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 RIBC1Q8N443 379 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 RNF148Q8N7C7 305 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 TP53I13Q8NBR0 393 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF248Q8NDW4 579 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 FBXO36Q8NEA4 188 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 FAM71CQ8NEG0 241 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OR2I1PQ8NGU4 316 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OR56A3Q8NH54 315 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 DTD1Q8TEA8 209 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CYB5D2Q8WUJ1 264 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 HTR3CQ8WXA8 447 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PROX1Q92786 737 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 BADQ92934 168 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 IGSF8Q969P0 613 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TOP1MTQ969P6 601 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 NTAN1Q96AB6 310 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ULK4Q96C45 1275 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TLCD1Q96CP7 247 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SNRNP40Q96DI7 357 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 RTP4Q96DX8 246 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 DUS3LQ96G46 650 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 P2RY11Q96G91 374 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 LRIG1Q96JA1 1093 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MRGPRX4Q96LA9 322 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SERPINB12Q96P63 405 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 LRRC37BQ96QE4 947 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CYP2S1Q96SQ9 504 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 FAM110AQ9BQ89 295 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 APOL2Q9BQE5 337 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CDADC1Q9BWV3 514 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PBX4Q9BYU1 374 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ANKRD60Q9BZ19 345 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CPEB1Q9BZB8 566 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 SLC39A8Q9C0K1 460 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TMEM168Q9H0V1 697 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A17Q9H1V8 727 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OPN3Q9H1Y3 402 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 KCNN2Q9H2S1 579 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OR51B6Q9H340 312 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 GAL3ST2Q9H3Q3 398 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 LRRN3Q9H3W5 708 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 RIMS4Q9H426 269 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 TOR3AQ9H497 397 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZNF768Q9H5H4 540 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 RANBP3Q9H6Z4 567 aaPredicted RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 GEMIN7Q9H840 131 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 MEAF6Q9HAF1 191 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 EBF2Q9HAK2 575 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A7Q9HAW7 530 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A10Q9HAW8 530 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A8Q9HAW9 530 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 FOLH1BQ9HBA9 442 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PLAC1Q9HBJ0 212 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZBTB26Q9HCK0 441 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 APMAPQ9HDC9 416 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MLXIPLQ9NP71 852 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CCNB1IP1Q9NPC3 277 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ADAP2Q9NPF8 381 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 BRD7Q9NPI1 651 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ZCCHC3Q9NUD5 404 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 LIN7CQ9NUP9 197 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 INTS9Q9NV88 658 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 MED17Q9NVC6 651 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PARPBPQ9NWS1 579 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SYBUQ9NX95 663 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PRR13Q9NZ81 148 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 RHCGQ9UBD6 479 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CYB5R1Q9UHQ9 305 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 PRSS50Q9UI38 385 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TBC1D24Q9ULP9 559 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SCML2Q9UQR0 700 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 CDYLQ9Y232 598 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 OSGIN2Q9Y236 505 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 MRPS33Q9Y291 106 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 AAR2Q9Y312 384 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 ENTPD2Q9Y5L3 495 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 NUMA1Q14980 2115 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 COL4A2P08572 1712 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 A0A1W2PPM1 405 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms