RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SCN4AP35499 1836 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 ALPK2Q86TB3 2170 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 C1orf226A1L170 272 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 NTN1O95631 604 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SSX1Q16384 188 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 LIPIQ6XZB0 460 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 TRAM1L1Q8N609 369 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 ASCC1Q8N9N2 400 aaKnown RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 MND1Q9BWT6 205 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CXXC1Q9P0U4 656 aaPredicted RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 NLKQ9UBE8 527 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 HCFC2Q9Y5Z7 792 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CEP290O15078 2479 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CD8B2A6NJW9 211 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 FAM47E-STBD1D6RA91 191 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 MPZL2O60487 215 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SLCO2B1O94956 709 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 RB1P06400 928 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CD8BP10966 210 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 OSMP13725 252 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 ZNF30P17039 623 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 PTX3P26022 381 aaPredicted RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 RPL3P39023 403 aaKnown RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 CLCNKAP51800 687 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 PRKCDQ05655 676 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 ZNF791Q3KP31 576 aaPredicted RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 SLC35G5Q96KT7 338 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 FCRL4Q96PJ5 515 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 MOV10Q9HCE1 1003 aaKnown RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 ANKHQ9HCJ1 492 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 MAPRE3Q9UPY8 281 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 TBC1D3BA6NDS4 549 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SMLR1H3BR10 107 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 QSOX1O00391 747 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SLC30A4O14863 429 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 PI15O43692 258 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 EPHX1P07099 455 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 MYL9P24844 172 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 APEX1P27695 318 aaKnown RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 UGT2B10P36537 528 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 FCHO2Q0JRZ9 810 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CDKL4Q5MAI5 379 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 HTR3DQ70Z44 454 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SLC7A13Q8TCU3 470 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 RAD51AP1Q96B01 352 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 KCTD7Q96MP8 289 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 OPALINQ96PE5 141 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 CTRCQ99895 268 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 AIF1LQ9BQI0 150 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 OR51I1Q9H343 314 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SPHK2Q9NRA0 654 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 ZNF624Q9P2J8 865 aaPredicted RBP14.55□□□□□ -0.08
USP43-202ENST00000570475 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 NOX1Q9Y5S8 564 aa14.55□□□□□ -0.08
USP43-202ENST00000570475 SLC2A2P11168 524 aaPredicted RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 CCR2P41597 374 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 XCR1P46094 333 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 HNRNPFP52597 415 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 RBBP4Q09028 425 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 TCEAL8Q8IYN2 117 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 TRMT2BQ96GJ1 504 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 BTBD2Q9BX70 525 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 BRF2Q9HAW0 419 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 TAAR2Q9P1P5 351 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 EXO1Q9UQ84 846 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 VWA8A3KMH1 1905 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 PRKYO43930 277 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 ADRA2AP08913 450 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 UQCRC2P22695 453 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 PUM1Q14671 1186 aaKnown RBP eCLIP14.54□□□□□ -0.08
USP43-202ENST00000570475 MPEG1Q2M385 716 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 ZNF805Q5CZA5 627 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 PODNL1Q6PEZ8 512 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 Q6ZNB5 142 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 PARS2Q7L3T8 475 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 MARCH9Q86YJ5 346 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 NUS1Q96E22 293 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 WFDC6Q9BQY6 131 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 SLC22A4Q9H015 551 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 TEX10Q9NXF1 929 aaPredicted RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 SEC14L4Q9UDX3 406 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 ACP5P13686 325 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 HSD3B1P14060 373 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 HSD3B2P26439 372 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 CSTF1Q05048 431 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 KCNC3Q14003 757 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 SLC30A6Q6NXT4 461 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 LACC1Q8IV20 430 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 SIX5Q8N196 739 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 FBLIM1Q8WUP2 373 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 UBE2E3Q969T4 207 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 TRMT61AQ96FX7 289 aaKnown RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 TRIM45Q9H8W5 580 aaPredicted RBP14.54□□□□□ -0.08
USP43-202ENST00000570475 BEX1Q9HBH7 125 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 HHATLQ9HCP6 504 aa14.54□□□□□ -0.08
USP43-202ENST00000570475 C5orf42Q9H799 3197 aa14.53□□□□□ -0.08
USP43-202ENST00000570475 A0A1W2PPK0 400 aa14.53□□□□□ -0.08
USP43-202ENST00000570475 FAM183AA6NL82 134 aa14.53□□□□□ -0.08
USP43-202ENST00000570475 UGDHO60701 494 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms