RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZYG11AQ6WRX3 759 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 RNF111Q6ZNA4 994 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 RTL4Q6ZR62 310 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 SLC15A4Q8N697 577 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 METTL6Q8TCB7 284 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CHTF18Q8WVB6 975 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 MAGED4Q96JG8 741 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 HBEGFQ99075 208 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 GSTO2Q9H4Y5 243 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CXorf21Q9HAI6 301 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 DEPPQ9NTK1 212 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 GRID1Q9ULK0 1009 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 PCDHA9Q9Y5H5 950 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 A0A1W2PS29 197 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 C1orf226A1L170 272 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 OR6C76A6NM76 312 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 CCL21O00585 134 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 CDH16O75309 829 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 ESRRBO95718 433 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 PROCP04070 461 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 CLPSP04118 112 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 MYL2P10916 166 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 NAA20P61599 178 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 TRA2BP62995 288 aaKnown RBP18.77■□□□□ 0.6
CLK3-225ENST00000569063 ZNF750Q32MQ0 723 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 MTFR2Q6P444 385 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 SLC29A4Q7RTT9 530 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 CHERPQ8IWX8 916 aaKnown RBP18.77■□□□□ 0.6
CLK3-225ENST00000569063 C1orf52Q8N6N3 182 aaKnown RBP18.77■□□□□ 0.6
CLK3-225ENST00000569063 GBP7Q8N8V2 638 aaPredicted RBP18.77■□□□□ 0.6
CLK3-225ENST00000569063 SLC22A8Q8TCC7 542 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 EPS8L3Q8TE67 593 aaKnown RBP18.77■□□□□ 0.6
CLK3-225ENST00000569063 DOK4Q8TEW6 326 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 TM4SF18Q96CE8 201 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 CES1P1Q9UKY3 287 aa18.77■□□□□ 0.6
CLK3-225ENST00000569063 DOPEY1Q5JWR5 2465 aa18.77■□□□□ 0.59
CLK3-225ENST00000569063 CCDC151A5D8V7 595 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 SMIM23A6NLE4 172 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 TFECO14948 347 aaPredicted RBP18.76■□□□□ 0.59
CLK3-225ENST00000569063 PLIN3O60664 434 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 NADKO95544 446 aaPredicted RBP18.76■□□□□ 0.59
CLK3-225ENST00000569063 CNR1P21554 472 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 HMOX2P30519 316 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 RFC3P40938 356 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 XKP51811 444 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 C3AR1Q16581 482 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 ZNF791Q3KP31 576 aaPredicted RBP18.76■□□□□ 0.59
CLK3-225ENST00000569063 SLC48A1Q6P1K1 146 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 LYPD8Q6UX82 237 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 OR2M7Q8NG81 312 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 RDH11Q8TC12 318 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 AGAP11Q8TF27 550 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 WWTR1Q9GZV5 400 aa18.76■□□□□ 0.59
CLK3-225ENST00000569063 SUCOQ9UBS9 1254 aaKnown RBP18.76■□□□□ 0.59
CLK3-225ENST00000569063 CROCCQ5TZA2 2017 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 SERTM1A2A2V5 107 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 UBFD1O14562 309 aaKnown RBP18.75■□□□□ 0.59
CLK3-225ENST00000569063 HS6ST1O60243 411 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 CPMP14384 443 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 KRT4P19013 534 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 PTGER1P34995 402 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 DNAJB13P59910 316 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 VSNL1P62760 191 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 HSF1Q00613 529 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 FUT7Q11130 342 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 EBPQ15125 230 aaKnown RBP18.75■□□□□ 0.59
CLK3-225ENST00000569063 CMPK2Q5EBM0 449 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 GALNT12Q8IXK2 581 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 DND1Q8IYX4 353 aaKnown RBP18.75■□□□□ 0.59
CLK3-225ENST00000569063 CCNYL1Q8N7R7 359 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 CCDC120Q96HB5 630 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 FAM173AQ9BQD7 235 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 ACPTQ9BZG2 426 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 SH2D2AQ9NP31 389 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 MID1IP1Q9NPA3 183 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 SACM1LQ9NTJ5 587 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 SH3BGRL2Q9UJC5 107 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 TINAGQ9UJW2 476 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 TIMM22Q9Y584 194 aa18.75■□□□□ 0.59
CLK3-225ENST00000569063 SPTAN1Q13813 2472 aaKnown RBP18.74■□□□□ 0.59
CLK3-225ENST00000569063 PINLYPA6NC86 204 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 GOLGA6L10A6NI86 522 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 H3BQF6 201 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 COPEO14579 308 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 CT62P0C5K7 136 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 CHN1P15882 459 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 PORP16435 677 aaPredicted RBP18.74■□□□□ 0.59
CLK3-225ENST00000569063 ABOP16442 354 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 SSTR4P31391 388 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 SLC18A2Q05940 514 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 RGS9BPQ6ZS82 235 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 GK5Q6ZS86 529 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 FGD2Q7Z6J4 655 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 ITLN2Q8WWU7 325 aaPredicted RBP18.74■□□□□ 0.59
CLK3-225ENST00000569063 TP53INP1Q96A56 240 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 SPACA9Q96E40 222 aaPredicted RBP18.74■□□□□ 0.59
CLK3-225ENST00000569063 GAL3ST4Q96RP7 486 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 FAIM2Q9BWQ8 316 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 PLSCR2Q9NRY7 297 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 OXSMQ9NWU1 459 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms