RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 C1QL3Q5VWW1 255 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 MDGA2Q7Z553 956 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 ST13P4Q8IZP2 240 aaPredicted RBP23.35■■□□□ 1.33
FANCA-228ENST00000567943 CPSF7Q8N684 471 aaKnown RBP23.35■■□□□ 1.33
FANCA-228ENST00000567943 DOK4Q8TEW6 326 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 ZNF721Q8TF20 911 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 CHTF18Q8WVB6 975 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 FAM111AQ96PZ2 611 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 SMC6Q96SB8 1091 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 PELOQ9BRX2 385 aaKnown RBP23.35■■□□□ 1.33
FANCA-228ENST00000567943 SHCBP1LQ9BZQ2 653 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 TSPAN10Q9H1Z9 355 aaPredicted RBP23.35■■□□□ 1.33
FANCA-228ENST00000567943 SLC17A7Q9P2U7 560 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 MYOTQ9UBF9 498 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 COPS7AQ9UBW8 275 aa23.35■■□□□ 1.33
FANCA-228ENST00000567943 HRKO00198 91 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 DYRK3O43781 588 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 ZNF354AO60765 605 aaPredicted RBP23.34■■□□□ 1.33
FANCA-228ENST00000567943 GUCY1B2O75343 617 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 CRCPO75575 148 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 HMGCS1Q01581 520 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 ZNF844Q08AG5 666 aa23.34■■□□□ 1.33
FANCA-228ENST00000567943 SENP5Q96HI0 755 aaPredicted RBP23.34■■□□□ 1.33
FANCA-228ENST00000567943 YARS2Q9Y2Z4 477 aaKnown RBP23.34■■□□□ 1.33
FANCA-228ENST00000567943 A0A1W2PS29 197 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 H3BQF6 201 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 TRIM13O60858 407 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 IGKV3-11P04433 115 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 CREB1P16220 341 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 PIK3R1P27986 724 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 HK2P52789 917 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 RNF4P78317 190 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 FJX1Q86VR8 437 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 CYP4Z2PQ8N1L4 340 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 TMEM156Q8N614 296 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 TCP10LQ8TDR4 215 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 RELTQ969Z4 430 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 TM4SF18Q96CE8 201 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 CNPPD1Q9BV87 410 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 GATA5Q9BWX5 397 aaPredicted RBP23.33■■□□□ 1.33
FANCA-228ENST00000567943 TNFRSF12AQ9NP84 129 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 PCDHA9Q9Y5H5 950 aa23.33■■□□□ 1.33
FANCA-228ENST00000567943 PCNX1Q96RV3 2341 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 WWP2O00308 870 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 OR6B1O95007 311 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 SLC35E2P0CK97 266 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 SERPINB3P29508 390 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 SSR4P51571 173 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 ALDH6A1Q02252 535 aaKnown RBP23.32■■□□□ 1.32
FANCA-228ENST00000567943 BTKQ06187 659 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 ZNF267Q14586 743 aaPredicted RBP23.32■■□□□ 1.32
FANCA-228ENST00000567943 SULF2Q8IWU5 870 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 MMP21Q8N119 569 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 OR4K14Q8NGD5 310 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 OR8K3Q8NH51 312 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 RIT1Q92963 219 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 APIPQ96GX9 242 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 FBXL20Q96IG2 436 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 ART5Q96L15 291 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 GPR137Q96N19 417 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 RASL10BQ96S79 203 aa23.32■■□□□ 1.32
FANCA-228ENST00000567943 C1orf226A1L170 272 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 SERTM1A2A2V5 107 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ALDH3A1P30838 453 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ERVK-8P63133 956 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ACSM2AQ08AH3 577 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ASPHQ12797 758 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 SPIN4Q56A73 249 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ACSM2BQ68CK6 577 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 CHERPQ8IWX8 916 aaKnown RBP23.31■■□□□ 1.32
FANCA-228ENST00000567943 OR5L2Q8NGL0 311 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 TMEM125Q96AQ2 219 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 MECRQ9BV79 373 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 MCM8Q9UJA3 840 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 ERVK-19Q9WJR5 959 aa23.31■■□□□ 1.32
FANCA-228ENST00000567943 A0A1B0GUH1 482 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 NPIPA5E9PKD4 350 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 RGS16O15492 202 aaPredicted RBP23.3■■□□□ 1.32
FANCA-228ENST00000567943 ZNHIT1O43257 154 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 PCDH7O60245 1069 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 ZG16O60844 167 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 COL8A1P27658 744 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 SOX3P41225 446 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 XKP51811 444 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 TRA2BP62995 288 aaKnown RBP23.3■■□□□ 1.32
FANCA-228ENST00000567943 RAE1P78406 368 aaKnown RBP23.3■■□□□ 1.32
FANCA-228ENST00000567943 SPRED3Q2MJR0 410 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 ZNF750Q32MQ0 723 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 SPDYAQ5MJ70 313 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 SLC48A1Q6P1K1 146 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 MAMDC2Q7Z304 686 aaPredicted RBP23.3■■□□□ 1.32
FANCA-228ENST00000567943 C9orf40Q8IXQ3 194 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 FAIM2Q9BWQ8 316 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 DEPPQ9NTK1 212 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 CES1P1Q9UKY3 287 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 NPIPA1Q9UND3 350 aa23.3■■□□□ 1.32
FANCA-228ENST00000567943 GNG14A0A1W2PPG7 69 aa23.29■■□□□ 1.32
FANCA-228ENST00000567943 UROSP10746 265 aa23.29■■□□□ 1.32
FANCA-228ENST00000567943 GALNSP34059 522 aa23.29■■□□□ 1.32
FANCA-228ENST00000567943 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms