RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PTGER1P34995 402 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 RFC3P40938 356 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 NEK2P51955 445 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SMSP52788 366 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 GPR85P60893 370 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 HERVK_113P63132 956 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ADORA2A-AS1P86434 159 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 TBL3Q12788 808 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 TRAF3Q13114 568 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 C3AR1Q16581 482 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CMPK2Q5EBM0 449 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PIGGQ5H8A4 983 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 TTC19Q6DKK2 380 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR52E8Q6IFG1 317 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 LETMD1Q6P1Q0 360 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ARHGAP11AQ6P4F7 1023 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 XKRXQ6PP77 449 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PAOXQ6QHF9 649 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 RNF111Q6ZNA4 994 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 C16orf47Q6ZP98 133 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 DGAT2L6Q6ZPD8 337 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 RTL4Q6ZR62 310 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 RGS9BPQ6ZS82 235 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 GK5Q6ZS86 529 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SLC29A4Q7RTT9 530 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PAGE2Q7Z2X7 111 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 MILR1Q7Z6M3 343 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 MRGPRGQ86SM5 289 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SLC22A16Q86VW1 577 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CHERPQ8IWX8 916 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR4N5Q8IXE1 308 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 C9orf40Q8IXQ3 194 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 METTL4Q8N3J2 472 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 TMEM151AQ8N4L1 468 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SLC15A4Q8N697 577 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 EIF1ADQ8N9N8 165 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR2M7Q8NG81 312 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR4F6Q8NGB9 312 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 UHMK1Q8TAS1 419 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 SLC22A8Q8TCC7 542 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ACMSDQ8TDX5 336 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 TRPC4APQ8TEL6 797 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 AGAP11Q8TF27 550 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ZNF483Q8TF39 744 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 PHF10Q8WUB8 498 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 RIT1Q92963 219 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PPWD1Q96BP3 646 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 MTFMTQ96DP5 389 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 TRIM44Q96DX7 344 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 SENP5Q96HI0 755 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 NSUN5Q96P11 429 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 FAM173AQ9BQD7 235 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CNPPD1Q9BV87 410 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ERVK-6Q9BXR3 956 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ELOVL6Q9H5J4 265 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 RUBCNLQ9H714 662 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ZDHHC11Q9H8X9 412 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 BRF2Q9HAW0 419 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CHST11Q9NPF2 352 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SEMA4BQ9NPR2 832 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 SACM1LQ9NTJ5 587 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 NMRK1Q9NWW6 199 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PSMC3IPQ9P2W1 217 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 TRPS1Q9UHF7 1281 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ADAM29Q9UKF5 820 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SNX6Q9UNH7 406 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ENTPD4Q9Y227 616 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 MEMO1Q9Y316 297 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CACNA1CQ13936 2221 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 FBN2P35556 2912 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 NINQ8N4C6 2090 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 DNAJC13O75165 2243 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF407Q9C0G0 2248 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 FREM3P0C091 2139 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 A0A1B0GTH9 108 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 A0A1B0GTL3 188 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 C1orf226A1L170 272 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PINLYPA6NC86 204 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 OR14I1A6ND48 311 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CAPN14A8MX76 684 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 HRKO00198 91 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PGRMC2O15173 223 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF354AO60765 605 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 GUCY1B2O75343 617 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SUPT7LO94864 414 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 GLSO94925 669 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 PDYNP01213 254 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 KRT6AP02538 564 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 GBAP04062 536 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 KRT6BP04259 564 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 P04436 131 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 KLK1P06870 262 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TPOP07202 933 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 RHOXF2BP0C7M4 288 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CCL3P10147 92 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms