RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 OR4K3Q96R72 315 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 GAL3ST4Q96RP7 486 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 CHP1Q99653 195 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 GPR21Q99679 349 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 AICDAQ9GZX7 198 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 OPN3Q9H1Y3 402 aaPredicted RBP12.49□□□□□ -0.41
SMG1-213ENST00000567737 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 INTS10Q9NVR2 710 aaKnown RBP12.49□□□□□ -0.41
SMG1-213ENST00000567737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.414e-9■□□□□ 8.2
SMG1-213ENST00000567737 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
SMG1-213ENST00000567737 BTNL10A8MVZ5 291 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 CAPN14A8MX76 684 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 KLF4O43474 513 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 LDB3O75112 727 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 IGHV4-39P01824 125 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 LIM2P55344 173 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 VLDLRP98155 873 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 SP140Q13342 867 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 RPS6KA2Q15349 733 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
SMG1-213ENST00000567737 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 OR2A2Q6IF42 318 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 CES3Q6UWW8 571 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 SLC29A4Q7RTT9 530 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 KLHDC8AQ8IYD2 350 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 CCDC116Q8IYX3 515 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 C7orf57Q8NEG2 295 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 OR56A3Q8NH54 315 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 CD200R1Q8TD46 325 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 REPS1Q96D71 796 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 KLHL4Q9C0H6 718 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
SMG1-213ENST00000567737 BARX1Q9HBU1 254 aaPredicted RBP12.48□□□□□ -0.41
SMG1-213ENST00000567737 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 BFARQ9NZS9 450 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 DYRK1BQ9Y463 629 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 NINQ8N4C6 2090 aa12.48□□□□□ -0.41
SMG1-213ENST00000567737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.47□□□□□ -0.41
SMG1-213ENST00000567737 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 FRG2CA6NGY1 282 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 GNB5O14775 395 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 LMX1BO60663 402 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 IFNB1P01574 187 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 PPP3CBP16298 524 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TBXA2RP21731 343 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
SMG1-213ENST00000567737 PLA2G16P53816 162 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TPM4P67936 248 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
SMG1-213ENST00000567737 KBTBD12Q3ZCT8 623 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TAGAPQ8N103 731 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 SLC35B2Q8TB61 432 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 SPPL2AQ8TCT8 520 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 CCT6BQ92526 530 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TMEM41AQ96HV5 264 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 SERINC2Q96SA4 455 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 COPS7BQ9H9Q2 264 aaPredicted RBP12.47□□□□□ -0.41
SMG1-213ENST00000567737 PELI2Q9HAT8 420 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TEX10Q9NXF1 929 aaPredicted RBP12.47□□□□□ -0.41
SMG1-213ENST00000567737 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 MAD1L1Q9Y6D9 718 aa12.47□□□□□ -0.41
SMG1-213ENST00000567737 TGM6O95932 706 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 IGKV3-11P04433 115 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 THBDP07204 575 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 SOD3P08294 240 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 ZNF16P17020 682 aaPredicted RBP12.46□□□□□ -0.41
SMG1-213ENST00000567737 EGR1P18146 543 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 CERS1P27544 350 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 PTPN6P29350 595 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 HNRNPH1P31943 449 aaKnown RBP12.46□□□□□ -0.41
SMG1-213ENST00000567737 SLC6A12P48065 614 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 NPY2RP49146 381 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 RGS4P49798 205 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 SIRPAP78324 504 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 ID2Q02363 134 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 SQLEQ14534 574 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 CASC4Q6P4E1 433 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 TRIM40Q6P9F5 258 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 TMPRSS11BQ86T26 416 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 FBXW5Q969U6 566 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 ZNF845Q96IR2 970 aaPredicted RBP12.46□□□□□ -0.41
SMG1-213ENST00000567737 DGAT2Q96PD7 388 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 KIFC1Q9BW19 673 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 ARL15Q9NXU5 204 aa12.46□□□□□ -0.41
SMG1-213ENST00000567737 PTBP2Q9UKA9 531 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms