RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SNRPAP09012 282 aaKnown RBP16.33■□□□□ 0.2
NME3-205ENST00000563854 PIGAP37287 484 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 MAGEA5P43359 124 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 CDH13P55290 713 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 MPEG1Q2M385 716 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 PRAMEF20Q5VT98 475 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 FAM219BQ5XKK7 198 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 TMEM251Q8N6I4 163 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 OR5M3Q8NGP4 307 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 CA5BP1Q8WTZ4 195 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 NTMT1Q9BV86 223 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 WWTR1Q9GZV5 400 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 IL1RL2Q9HB29 575 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 FARSBQ9NSD9 589 aaKnown RBP16.33■□□□□ 0.2
NME3-205ENST00000563854 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
NME3-205ENST00000563854 SLC12A4Q9UP95 1085 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 NCOA6Q14686 2063 aaPredicted RBP16.33■□□□□ 0.2
NME3-205ENST00000563854 A0A1B0GTL3 188 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 ATP6AP2A0A1C7CYW4 349 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 PGRMC2O15173 223 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 ATP6AP2O75787 350 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 NADKO95544 446 aaPredicted RBP16.32■□□□□ 0.2
NME3-205ENST00000563854 OTCP00480 354 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 PIK3R1P27986 724 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 SSTR4P31391 388 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 KCNJ2P63252 427 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 SPRED3Q2MJR0 410 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 CCNYL2Q5T2Q4 361 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 LGSNQ5TDP6 509 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 NDUFAF5Q5TEU4 345 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 C6orf163Q5TEZ5 329 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 LETMD1Q6P1Q0 360 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 RGS9BPQ6ZS82 235 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 PAGE2Q7Z2X7 111 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 GDF7Q7Z4P5 450 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 FAM109AQ8N4B1 249 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 OR5M9Q8NGP3 310 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 KIF18AQ8NI77 898 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 ZNF483Q8TF39 744 aaPredicted RBP16.32■□□□□ 0.2
NME3-205ENST00000563854 SPACA9Q96E40 222 aaPredicted RBP16.32■□□□□ 0.2
NME3-205ENST00000563854 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 HBEGFQ99075 208 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 TP63Q9H3D4 680 aaPredicted RBP16.32■□□□□ 0.2
NME3-205ENST00000563854 EXO5Q9H790 373 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 PLSCR2Q9NRY7 297 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 PSD3Q9NYI0 1048 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 AHSPQ9NZD4 102 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 TNFRSF10DQ9UBN6 386 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 HRH3Q9Y5N1 445 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 MYO9AB2RTY4 2548 aa16.32■□□□□ 0.2
NME3-205ENST00000563854 CREBBPQ92793 2442 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 KIF2AO00139 706 aaPredicted RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 PPP6CO00743 305 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 GLSO94925 669 aaPredicted RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 CELA3AP09093 270 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 SLC35E2P0CK97 266 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 NT5EP21589 574 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 PTGER4P35408 488 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 MAPK12P53778 367 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 SLC37A1P57057 533 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 EBPQ15125 230 aaKnown RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 ZNF791Q3KP31 576 aaPredicted RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 SLC22A10Q63ZE4 541 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 GALNT12Q8IXK2 581 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 RPRMLQ8N4K4 120 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 MARVELD2Q8N4S9 558 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 TRPC4APQ8TEL6 797 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 SELENOMQ8WWX9 145 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 JSRP1Q96MG2 331 aaPredicted RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 LDAHQ9H6V9 325 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 ZDHHC11Q9H8X9 412 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
NME3-205ENST00000563854 GTF3C1Q12789 2109 aa16.31■□□□□ 0.2
NME3-205ENST00000563854 FAM90A27PA6NNH2 459 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 OR4F21O95013 312 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 PDYNP01213 254 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 SBK3P0C264 359 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 TAC1P20366 129 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 GGTA1PQ4G0N0 100 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 HLA-DQA1Q5Y7H0 255 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 TMEM211Q6ICI0 200 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 ZNF585AQ6P3V2 769 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 LYPD8Q6UX82 237 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 TMEM64Q6YI46 380 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 COMMD6Q7Z4G1 85 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 IFT20Q8IY31 132 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 SLC15A4Q8N697 577 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 OR10G3Q8NGC4 313 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 OR4K14Q8NGD5 310 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 PNPLA3Q9NST1 481 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 SNX6Q9UNH7 406 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 PCNX1Q96RV3 2341 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 LRBAP50851 2863 aa16.3■□□□□ 0.2
NME3-205ENST00000563854 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 OR6C76A6NM76 312 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 GOLGA8RI6L899 631 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms