RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ASB4Q9Y574 426 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 DIDO1Q9BTC0 2240 aaKnown RBP14.63□□□□□ -0.07
USB1-208ENST00000563207 OR5H15A6NDH6 313 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 TMEM233B4DJY2 109 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 FAM227AF5H4B4 570 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 PROM1O43490 865 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 B4GALT2O60909 372 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 MYO1DO94832 1006 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 STSP08842 583 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 CPN2P22792 545 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 TPP2P29144 1249 aaPredicted RBP14.62□□□□□ -0.07
USB1-208ENST00000563207 PPP2R1BP30154 601 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 MAPK12P53778 367 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 OCRLQ01968 901 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 TNFRSF17Q02223 184 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 PLAG1Q6DJT9 500 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 H3F3CQ6NXT2 135 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 RGS9BPQ6ZS82 235 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 Q6ZSR9 355 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 LRRC34Q8IZ02 419 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 KIF2BQ8N4N8 673 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 CKAP2Q8WWK9 683 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 TANKQ92844 425 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 PPP3R2Q96LZ3 170 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 C7orf26Q96N11 449 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 MAPKAP1Q9BPZ7 522 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 TUBB1Q9H4B7 451 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 ZNF395Q9H8N7 513 aaPredicted RBP14.62□□□□□ -0.07
USB1-208ENST00000563207 C1orf109Q9NX04 203 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 VTI1BQ9UEU0 232 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 FBXW2Q9UKT8 454 aa14.62□□□□□ -0.07
USB1-208ENST00000563207 PIP5K1BO14986 540 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 TMPRSS11DO60235 418 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 PCDH7O60245 1069 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 PRAMEF2O60811 474 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 CTNSO60931 367 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 SEC22BO75396 215 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 UNC5CO95185 931 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 LINC00032P0C843 101 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 ICAM2P13598 275 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 TIA1P31483 386 aaKnown RBP eCLIP14.61□□□□□ -0.07
USB1-208ENST00000563207 CD96P40200 585 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 TUBA3CQ13748 450 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 NSDHLQ15738 373 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 SMU1Q2TAY7 513 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 XKR7Q5GH72 579 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 ACER2Q5QJU3 275 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 ZNF468Q5VIY5 522 aaPredicted RBP14.61□□□□□ -0.07
USB1-208ENST00000563207 TUBA3EQ6PEY2 450 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 PAPD4Q6PIY7 484 aaKnown RBP14.61□□□□□ -0.07
USB1-208ENST00000563207 PIWIL2Q8TC59 973 aaKnown RBP14.61□□□□□ -0.07
USB1-208ENST00000563207 APIPQ96GX9 242 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 PTCHD1Q96NR3 888 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 TSPAN10Q9H1Z9 355 aaPredicted RBP14.61□□□□□ -0.07
USB1-208ENST00000563207 RPF2Q9H7B2 306 aaKnown RBP14.61□□□□□ -0.07
USB1-208ENST00000563207 KCNK13Q9HB14 408 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 LRTM1Q9HBL6 345 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 KLHL1Q9NR64 748 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 PRTFDC1Q9NRG1 225 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 SH3BGRL2Q9UJC5 107 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 ATG4BQ9Y4P1 393 aa14.61□□□□□ -0.07
USB1-208ENST00000563207 GNG14A0A1W2PPG7 69 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 TRPC5OSA6NMA1 111 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
USB1-208ENST00000563207 HDAC3O15379 428 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 RASAL1O95294 804 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 PRF1P14222 555 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 PCSK2P16519 638 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 MAPK1P28482 360 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 HNRNPH2P55795 449 aaKnown RBP14.6□□□□□ -0.07
USB1-208ENST00000563207 BTKQ06187 659 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 MAD2L1Q13257 205 aaPredicted RBP14.6□□□□□ -0.07
USB1-208ENST00000563207 SERTAD2Q14140 314 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 KIAA0040Q15053 153 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 SPINK14Q6IE38 97 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 NOXRED1Q6NXP6 359 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 GFRALQ6UXV0 394 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 SCUBE1Q8IWY4 988 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 MDS2Q8NDY4 140 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 FAIM2Q9BWQ8 316 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 RNF32Q9H0A6 362 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 MYO7BQ6PIF6 2116 aa14.6□□□□□ -0.07
USB1-208ENST00000563207 IGKV3D-11A0A0A0MRZ8 115 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 A0A1W2PR48 441 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 TCRBV16S1A1N1A0A5B0 115 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 C1orf226A1L170 272 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 A8MUA0 341 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 SKAP2O75563 359 aaPredicted RBP14.59□□□□□ -0.07
USB1-208ENST00000563207 GBAP04062 536 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 ANXA4P09525 319 aaPredicted RBP14.59□□□□□ -0.07
USB1-208ENST00000563207 NR2F6P10588 404 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 DRD2P14416 443 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 MAOAP21397 527 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 GRNP28799 593 aaKnown RBP14.59□□□□□ -0.07
USB1-208ENST00000563207 OR4D2P58180 307 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 SLC26A5P58743 744 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 AP2B1P63010 937 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 RAE1P78406 368 aaKnown RBP14.59□□□□□ -0.07
USB1-208ENST00000563207 ACTN3Q08043 901 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms