RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 OR1B1Q8NGR6 318 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PCNPQ8WW12 178 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 MR1Q95460 341 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF274Q96GC6 653 aaPredicted RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 RASL10BQ96S79 203 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PARK7Q99497 189 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SLC39A8Q9C0K1 460 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ZCCHC17Q9NP64 241 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SH3GLB2Q9NR46 395 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 MED17Q9NVC6 651 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF319Q9P2F9 582 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ARMCX3Q9UH62 379 aaPredicted RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SPATA2Q9UM82 520 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SH3GLB1Q9Y371 365 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 TMED7Q9Y3B3 224 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 BLMP54132 1417 aaPredicted RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 NAIPQ13075 1403 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 THSD7AQ9UPZ6 1657 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 CDC42BPGQ6DT37 1551 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SRCAPQ6ZRS2 3230 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PHRF1Q9P1Y6 1649 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 CASZ1Q86V15 1759 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 MYOM1P52179 1685 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 KIF1AQ12756 1690 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 A0A087WWV3 80 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TRBV5-4A0A0C4DH59 114 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF840PA6NDX5 716 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RPL37AP8A6NKH3 93 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 SDR42E2A6NKP2 422 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 E9PAM4 449 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 CCSO14618 274 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 B4GAT1O43505 415 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF354AO60765 605 aaPredicted RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 PRDM1O75626 825 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 SLU7O95391 586 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RENP00797 406 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 LYNP07948 512 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 SUPT20HL2P0C7V6 817 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 C8orf89P0DMQ9 161 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 SPRP35270 261 aaPredicted RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ELK3P41970 407 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 FRKP42685 505 aaPredicted RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RPL34P49207 117 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 FKBP1BP68106 108 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 POU5F1Q01860 360 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ARHGAP1Q07960 439 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ACKR1Q16570 336 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TMEM44Q2T9K0 475 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 VWA2Q5GFL6 755 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF506Q5JVG8 444 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 LYPLAL1Q5VWZ2 237 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 VITQ6UXI7 678 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TMEM64Q6YI46 380 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 NUFIP2Q7Z417 695 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 GALNTL5Q7Z4T8 443 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 UNC5CLQ8IV45 518 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 CLEC1AQ8NC01 280 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 BEST4Q8NFU0 473 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RHOXF1Q8NHV9 184 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TYMSOSQ8TAI1 123 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 GANCQ8TET4 914 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 AGAP11Q8TF27 550 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 LINC00167Q96N53 147 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RUNDC3BQ96NL0 473 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RCHY1Q96PM5 261 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 LRRC2Q9BYS8 371 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 CUEDC2Q9H467 287 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 SRD5A3Q9H8P0 318 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ABCB10Q9NRK6 738 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 MRPL17Q9NRX2 175 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TMEM161AQ9NX61 479 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF107Q9UII5 783 aaPredicted RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 FBXL5Q9UKA1 691 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 NIP7Q9Y221 180 aaKnown RBP eCLIP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 MRPL11Q9Y3B7 192 aaKnown RBP2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 ETV7Q9Y603 341 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 TUBGCP6Q96RT7 1819 aa2.39□□□□□ -2.03
HDGFL3-202ENST00000562702 RGPD2P0DJD1 1756 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 COL14A1Q05707 1796 aaKnown RBP2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 WNK3Q9BYP7 1800 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 LOC390937A0A1W2PQ73 354 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 FAM149AA5PLN7 773 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 PHOX2AO14813 284 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 OR6B1O95007 311 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 ANPEPP15144 967 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 PPP2R1AP30153 589 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 MATKP42679 507 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 KCNJ1P48048 391 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 RPS27AP62979 156 aaKnown RBP2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 EIF4EBP2Q13542 120 aaPredicted RBP2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 NHSL2Q5HYW2 709 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 LRRC38Q5VT99 294 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 AGAP6Q5VW22 663 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 LEMD1Q68G75 181 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 NEPROQ6NW34 567 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 PODNL1Q6PEZ8 512 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF730Q6ZMV8 503 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 Q6ZVH6 145 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 SERINC5Q86VE9 423 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms