RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 STSP08842 583 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L2P0CJ85 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L3P0CJ86 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L4P0CJ87 422 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L5P0CJ88 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L6P0CJ89 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4L7P0CJ90 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 JUPP14923 745 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 AMD1P17707 334 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 GABRB1P18505 474 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 SDC1P18827 310 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 POLR2CP19387 275 aaPredicted RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 GSTM5P46439 218 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 MAP2K3P46734 347 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DGKGP49619 791 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 NKX2-5P52952 324 aaPredicted RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 VLDLRP98155 873 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ALDH6A1Q02252 535 aaKnown RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ACSM2AQ08AH3 577 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 TP53BP2Q13625 1128 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ARHGEF7Q14155 803 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 GAS6Q14393 721 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 LARS2Q15031 903 aaKnown RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 GPR19Q15760 415 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 OCLNQ16625 522 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 TSTQ16762 297 aaKnown RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 COL28A1Q2UY09 1125 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CCDC58Q4VC31 144 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ARMC12Q5T9G4 340 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 FRG2Q64ET8 278 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ACSM2BQ68CK6 577 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 NOXRED1Q6NXP6 359 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 TSSK4Q6SA08 328 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 Q6ZS52 159 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 NUDT18Q6ZVK8 323 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ETFBKMTQ8IXQ9 262 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CYP4Z2PQ8N1L4 340 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 LRRC17Q8N6Y2 441 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CELF2-AS1Q8N7Q2 184 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 B3GNT7Q8NFL0 401 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 OR2AP1Q8NGE2 309 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 AKAP1Q92667 903 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 TPD52L3Q96J77 140 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 LRIG1Q96JA1 1093 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 C7orf34Q96L11 122 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 RPL10LQ96L21 214 aaKnown RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 FRG2BQ96QU4 278 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 FEVQ99581 238 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 AIFM2Q9BRQ8 373 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CENPOQ9BU64 300 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUSP26Q9BV47 211 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ACPTQ9BZG2 426 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CIPCQ9C0C6 399 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 OR51E2Q9H255 320 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 PIGUQ9H490 435 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 IKZF5Q9H5V7 419 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 PRMT8Q9NR22 394 aaPredicted RBP8.15□□□□□ -1.1
CCDC33-209ENST00000560565 RAD18Q9NS91 495 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 EXD2Q9NVH0 621 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ARL15Q9NXU5 204 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 IL17CQ9P0M4 197 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 VPS29Q9UBQ0 182 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 DUX4Q9UBX2 424 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 NDOR1Q9UHB4 597 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CRLS1Q9UJA2 301 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 SESN1Q9Y6P5 492 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 R4GN57 208 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 ZFYVE26Q68DK2 2539 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 CEP250Q9BV73 2442 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 SPAG17Q6Q759 2223 aa8.15□□□□□ -1.1
CCDC33-209ENST00000560565 SPEGQ15772 3267 aa8.15□□□□□ -1.11
CCDC33-209ENST00000560565 A0A1B0GVI7 797 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 FAM240BA0A1B0GVZ2 78 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 A0A1W2PQ09 198 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 PIPSLA2A3N6 862 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 OR6C70A6NIJ9 312 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 ZAR1LA6NP61 321 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 FAAHO00519 579 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 NPC1O15118 1278 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 SCAMP2O15127 329 aaKnown RBP8.14□□□□□ -1.11
CCDC33-209ENST00000560565 FZD6O60353 706 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 ICMTO60725 284 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 GADD45GO95257 159 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 POP4O95707 220 aaKnown RBP8.14□□□□□ -1.11
CCDC33-209ENST00000560565 RAB36O95755 333 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 EGFP01133 1207 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 TRBC1P01850 177 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 CISD3P0C7P0 127 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 SLC2A2P11168 524 aaPredicted RBP8.14□□□□□ -1.11
CCDC33-209ENST00000560565 ACADMP11310 421 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 SRCP12931 536 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 OSMP13725 252 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 SPNP16150 400 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 GSTM3P21266 225 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 ACRV1P26436 265 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 PTPN6P29350 595 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 SERPINA4P29622 427 aa8.14□□□□□ -1.11
CCDC33-209ENST00000560565 C21orf33P30042 268 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms