RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TMEM129A0AVI4 362 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 FAM220BPB1ANY3 271 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TTI1O43156 1089 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TSPAN2O60636 221 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TSC22D2O75157 780 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 SNRPCP09234 159 aaKnown RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 CPA3P15088 417 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 EZRP15311 586 aaKnown RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ATP6V1B1P15313 513 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TNFSF10P50591 281 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 SNU13P55769 128 aaKnown RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ASIC1P78348 528 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 GIT2Q14161 759 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 HEPACAMQ14CZ8 416 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 STXBP2Q15833 593 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 UNC50Q53HI1 259 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 DDI2Q5TDH0 399 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 RHBDD2Q6NTF9 364 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TMEM126BQ8IUX1 230 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 CCDC83Q8IWF9 413 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 PRR22Q8IZ63 422 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ZNF525Q8N782 197 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 GOT1L1Q8NHS2 421 aaPredicted RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 FBXO25Q8TCJ0 367 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 CAPNS2Q96L46 248 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ZIM3Q96PE6 472 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 C19orf43Q9BQ61 176 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 PAXXQ9BUH6 204 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ST6GALNAC5Q9BVH7 336 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 DEFB126Q9BYW3 111 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 ZWILCHQ9H900 591 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 Q9HAA7 133 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 IL1RL2Q9HB29 575 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 TECRQ9NZ01 308 aaKnown RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 RCOR3Q9P2K3 495 aaPredicted RBP2.64□□□□□ -1.99
VPS13C-207ENST00000558919 SEC14L4Q9UDX3 406 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 IKZF3Q9UKT9 509 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 LIPT1Q9Y234 373 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 FAM205AQ6ZU69 1335 aa2.64□□□□□ -1.99
VPS13C-207ENST00000558919 IGHV3OR16-12A0A075B7B8 117 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 A4D1N5 150 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 MEI4A8MW99 385 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 SAP18O00422 153 aaKnown RBP2.63□□□□□ -1.99
VPS13C-207ENST00000558919 GAS8O95995 478 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 ZNF19P17023 458 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 CYP3A5P20815 502 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 DRD3P35462 400 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 MDH2P40926 338 aaKnown RBP2.63□□□□□ -1.99
VPS13C-207ENST00000558919 RGRP47804 291 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 CDKL1Q00532 357 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 PAX2Q02962 417 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 RPS6KA1Q15418 735 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 ZNF79Q15937 498 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 PPP1R3AQ16821 1122 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 FUT11Q495W5 492 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 ODF2Q5BJF6 829 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 HECTD3Q5T447 861 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 HAS2Q92819 552 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 TEX13BQ9BXU2 312 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 COPS7BQ9H9Q2 264 aaPredicted RBP2.63□□□□□ -1.99
VPS13C-207ENST00000558919 RNPEPL1Q9HAU8 725 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 ZNF275Q9NSD4 429 aaPredicted RBP2.63□□□□□ -1.99
VPS13C-207ENST00000558919 IMPAD1Q9NX62 359 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 VNN3Q9NY84 501 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 CLIP2Q9UDT6 1046 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 EXOC7Q9UPT5 735 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 ATG4BQ9Y4P1 393 aa2.63□□□□□ -1.99
VPS13C-207ENST00000558919 CFAP65Q6ZU64 1925 aaKnown RBP2.63□□□□□ -1.99
VPS13C-207ENST00000558919 KLF18A0A0U1RQI7 1052 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 SH3PXD2BA1X283 911 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 SLC15A5A6NIM6 579 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 CCT8L1PA6NM43 557 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 E7ENQ6 273 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 H0Y626 953 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 PRAMEF12O95522 483 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 GOT2P00505 430 aaKnown RBP2.62□□□□□ -1.99
VPS13C-207ENST00000558919 NUDT17P0C025 328 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 PGAM2P15259 253 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 HMGCLP35914 325 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 SLC25A1P53007 311 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 MFAP2P55001 183 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 KCNK10P57789 538 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 ERVPABLB-1P60509 514 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 YWHAHQ04917 246 aaPredicted RBP2.62□□□□□ -1.99
VPS13C-207ENST00000558919 STX1AQ16623 288 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 GSG1Q2KHT4 349 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 KCTD11Q693B1 232 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 MOB2Q70IA6 237 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 SLC34A3Q8N130 599 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 OR6M1Q8NGM8 313 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 VN1R17PQ8TDU5 208 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 UBTD2Q8WUN7 234 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 PHYHIPLQ96FC7 376 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 EPSTI1Q96J88 318 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 CCT8L2Q96SF2 557 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 NTMT1Q9BV86 223 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 GRPEL1Q9HAV7 217 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 MAGEF1Q9HAY2 307 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 ABCB8Q9NUT2 735 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms