RNA–Protein interactions for RNA: ENST00000558452.1

RNF31-206, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-206	ENST00000558452	NSUN5	Q96P11	429 aa	Known RBP	11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	TMEM237	Q96Q45	408 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	CCT7	Q99832	543 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	CCDC28B	Q9BUN5	200 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	ZNF717	Q9BY31	904 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	HES7	Q9BYE0	225 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	C20orf27	Q9GZN8	174 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	KLHL1	Q9NR64	748 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	MS4A12	Q9NXJ0	267 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	HEY2	Q9UBP5	337 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	PPT2	Q9UMR5	302 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	CLCA3P	Q9Y6N3	262 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	PRRC2C	Q9Y520	2896 aa	Known RBP	11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	COL12A1	Q99715	3063 aa		11.97	□□□□□ -0.49
RNF31-206	ENST00000558452	SVIL	O95425	2214 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	EML6	Q6ZMW3	1958 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	HIVEP3	Q5T1R4	2406 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	FCHO1	O14526	889 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	SLC22A2	O15244	555 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	LYPLA1	O75608	230 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ZFAND5	O76080	213 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ETHE1	O95571	254 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	LDLR	P01130	860 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	SP1	P08047	785 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	KIT	P10721	976 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	GP1BB	P13224	206 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	MST1	P26927	711 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ADSL	P30566	484 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	TRHR	P34981	398 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	BSG	P35613	385 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	CYB561	P49447	251 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	IGLV3-21	P80748	117 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	PMP22	Q01453	160 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	SRSF11	Q05519	484 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	BNIP1	Q12981	228 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	GALNTL6	Q49A17	601 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	GGTA1P	Q4G0N0	100 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	SH2D4B	Q5SQS7	431 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	CES4A	Q5XG92	561 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	MRM1	Q6IN84	353 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	EPGN	Q6UW88	154 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ACAD11	Q709F0	780 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	RPS27L	Q71UM5	84 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	GALNTL5	Q7Z4T8	443 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	MILR1	Q7Z6M3	343 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	GPR180	Q86V85	440 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ZNF227	Q86WZ6	799 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	CLYBL	Q8N0X4	340 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	FITM2	Q8N6M3	262 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ZNF781	Q8N8C0	355 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	MORN4	Q8NDC4	146 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	OR4F6	Q8NGB9	312 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	OR14A16	Q8NHC5	309 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	ZNF483	Q8TF39	744 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	THAP3	Q8WTV1	239 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	MTFMT	Q96DP5	389 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	C5orf34	Q96MH7	638 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	RPF2	Q9H7B2	306 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	DDX31	Q9H8H2	851 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	PHF11	Q9UIL8	331 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452	OSGIN2	Q9Y236	505 aa		11.96	□□□□□ -0.49
RNF31-206	ENST00000558452		A0A0A6YYD5	115 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	ASPDH	A6ND91	283 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	CYSRT1	A8MQ03	144 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	PROM1	O43490	865 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	FGF17	O60258	216 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	PRKN	O60260	465 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	EED	O75530	441 aa	Known RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	ITGA10	O75578	1167 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	STS	P08842	583 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	TNNI3	P19429	210 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	TLX1	P31314	330 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	BUD31	P41223	144 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	HLCS	P50747	726 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	CDH13	P55290	713 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	PKNOX1	P55347	436 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	TNFRSF17	Q02223	184 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	ID2	Q02363	134 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	LCP2	Q13094	533 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	BIK	Q13323	160 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	KRT72	Q14CN4	511 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	MAPKAPK3	Q16644	382 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	C4orf17	Q53FE4	359 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	UNC50	Q53HI1	259 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	C10orf62	Q5T681	223 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	FRG2	Q64ET8	278 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	C18orf63	Q68DL7	685 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	GFRAL	Q6UXV0	394 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	FAM98A	Q8NCA5	519 aa	Known RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	TANK	Q92844	425 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	ERP27	Q96DN0	273 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	FRG2B	Q96QU4	278 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	SERPINI1	Q99574	410 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	GSTO2	Q9H4Y5	243 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	PNPO	Q9NVS9	261 aa		11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	LYAR	Q9NX58	379 aa	Known RBP	11.95	□□□□□ -0.5
RNF31-206	ENST00000558452	ATG4B	Q9Y4P1	393 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms