RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ARHGEF39Q8N4T4 335 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 OR7G3Q8NG95 312 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 HUS1BQ8NHY5 278 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 SMPDL3AQ92484 453 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 CMTM5Q96DZ9 223 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 CLPTM1LQ96KA5 538 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 ZFYVE21Q9BQ24 234 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 RAB11FIP5Q9BXF6 653 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 TGIF2Q9GZN2 237 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 STMN3Q9NZ72 180 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 CDC14AQ9UNH5 594 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 ZNF835Q9Y2P0 537 aa10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 INTS1Q8N201 2190 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-204ENST00000558376 SLC28A1O00337 649 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SAP18O00422 153 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RGS14O43566 566 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 NQO1P15559 274 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 IL12AP29459 219 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SSTR2P30874 369 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CPOXP36551 454 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 EMP3P54852 163 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ERVK-8P63133 956 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 EMX2Q04743 252 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RBPJQ06330 500 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CUL3Q13618 768 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 PTGR1Q14914 329 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ARHGAP19Q14CB8 494 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 KIAA0040Q15053 153 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 TBCCQ15814 346 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 VPS26BQ4G0F5 336 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ABHD17BQ5VST6 288 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 LCTLQ6UWM7 567 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 NCCRP1Q6ZVX7 275 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ZC3H7AQ8IWR0 971 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 C10orf67Q8IYJ2 551 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CSNK1A1LQ8N752 337 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CLHC1Q8NHS4 586 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RP9Q8TA86 221 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RCN3Q96D15 328 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CCT7Q99832 543 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 LRTM1Q9HBL6 345 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SDR39U1Q9NRG7 319 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 C14orf105Q9NVL8 296 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 PACSIN3Q9UKS6 424 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 POLR3HQ9Y535 204 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 A0A0A6YYC8 382 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 IGHV3-20A0A0C4DH32 117 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 IGKV1-8A0A0C4DH67 115 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 A8MUI8 341 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 H0YIV9 168 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 I3L1I5 382 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 FBP2O00757 339 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ZNHIT1O43257 154 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 TGFB1P01137 390 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 STATHP02808 62 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 AGAP20933 346 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 HNF4AP41235 474 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 CASP2P42575 452 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RPS13P62277 151 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 MAT1AQ00266 395 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ZNF33BQ06732 778 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 RBBP5Q15291 538 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 ZNF766Q5HY98 468 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 FCRLBQ6BAA4 426 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 OGFOD2Q6N063 350 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SPATA19Q7Z5L4 167 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 PAQR7Q86WK9 346 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 C17orf64Q86WR6 236 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 MIER2Q8N344 545 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SUN3Q8TAQ9 357 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 VPS33AQ96AX1 596 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 MVB12AQ96EY5 273 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 MMABQ96EY8 250 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 HES7Q9BYE0 225 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 MKKSQ9NPJ1 570 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 PFDN4Q9NQP4 134 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 AIG1Q9NVV5 245 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 GPRC5BQ9NZH0 403 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 DLGAP4Q9Y2H0 992 aa10.47□□□□□ -0.73
RABGGTA-204ENST00000558376 LCMT2O60294 686 aaKnown RBP10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 UGDHO60701 494 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 IDO1P14902 403 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 TACR1P25103 407 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 CMPK1P30085 196 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 HSD17B2P37059 387 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 ZFP36L2P47974 494 aaKnown RBP10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 RASSF2P50749 326 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 SMSP52788 366 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 CASP6P55212 293 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 STX1BP61266 288 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 ICE2Q659A1 982 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 MED27Q6P2C8 311 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 CYP20A1Q6UW02 462 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 Q6ZPB1 254 aaPredicted RBP10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 LIX1Q8N485 282 aa10.46□□□□□ -0.74
RABGGTA-204ENST00000558376 KRTCAP2Q8N6L1 136 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms