RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 TESQ9UGI8 421 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PLXNA2O75051 1894 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PDE4DIPQ5VU43 2346 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TMEM202A6NGA9 273 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 NOTOA8MTQ0 251 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLC30A4O14863 429 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 MMP20O60882 483 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TIMP1P01033 207 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PRKCAP17252 672 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 AZGP1P25311 298 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ITGB8P26012 769 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 KCNJ5P48544 419 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 WNT4P56705 351 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 C19orf57Q0VDD7 668 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 HNRNPA0Q13151 305 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TPBGQ13641 420 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 GPNMBQ14956 572 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SEC23BQ15437 767 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF628Q5EBL2 1059 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 LIPKQ5VXJ0 399 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 NXPE4Q6UWF7 544 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TCEANCQ8N8B7 351 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 RASGEF1AQ8N9B8 481 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLC38A5Q8WUX1 472 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLC5A11Q8WWX8 675 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TTC9Q92623 222 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 GLYATL1Q969I3 302 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF764Q96H86 408 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 RIOK2Q9BVS4 552 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLC6A16Q9GZN6 736 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 FGF20Q9NP95 211 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ACOXLQ9NUZ1 547 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PCDHGB7Q9Y5F8 929 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 A0A1W2PRQ8 180 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 TFECO14948 347 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-232ENST00000557487 ARHGEF9O43307 516 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 KLHL18O94889 574 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 TGFB1P01137 390 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 URODP06132 367 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 CKMP06732 381 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 MSL3P1P0C860 447 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 CTSAP10619 480 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 GSTM3P21266 225 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 FGF9P31371 208 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-232ENST00000557487 PREPP48147 710 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 RAB40BQ12829 278 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 TAB1Q15750 504 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 LEXMQ3ZCV2 418 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 PLET1Q6UQ28 207 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 Q6ZVL8 140 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 GPR32P1Q8NGA4 272 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 OR52I1Q8NGK6 324 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 ZFAND1Q8TCF1 268 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 TTYH2Q9BSA4 534 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 MMP28Q9H239 520 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 CXorf36Q9H7Y0 433 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 RPRD1BQ9NQG5 326 aaKnown RBP15.46■□□□□ 0.07
SHMT2-232ENST00000557487 SEMA3GQ9NS98 782 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 TAAR2Q9P1P5 351 aa15.46■□□□□ 0.07
SHMT2-232ENST00000557487 BCHEP06276 602 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 KLK1P06870 262 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 IL3P08700 152 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 DDCP20711 480 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 CFL1P23528 166 aaKnown RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 HLA-FP30511 346 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 RAB25P57735 213 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 RACK1P63244 317 aaKnown RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 RIN1Q13671 783 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 PYDC2Q56P42 97 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 ZNF730Q6ZMV8 503 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 QSOX2Q6ZRP7 698 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 LRRC56Q8IYG6 542 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 NRSN1Q8IZ57 195 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 DUSP18Q8NEJ0 188 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 OR9A1PQ8NGU1 263 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 HCAR2Q8TDS4 363 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 JPH3Q8WXH2 748 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 TMEM19Q96HH6 336 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 OR51B5Q9H339 312 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 RANGRFQ9HD47 186 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 ZSCAN32Q9NX65 697 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 NUFIP1Q9UHK0 495 aaKnown RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 EXOSC1Q9Y3B2 195 aaKnown RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 A6NL46 340 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 GABRA5P31644 462 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 IL12RB1P42701 662 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 MAP2K3P46734 347 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 CTSCP53634 463 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 DAB2P98082 770 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 UBE3AQ05086 875 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 TMEM115Q12893 351 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 TARDBPQ13148 414 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHMT2-232ENST00000557487 DPPA4Q7L190 304 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 KRT78Q8N1N4 520 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 HORMAD2Q8N7B1 307 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 C19orf18Q8NEA5 215 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 ANGPTL6Q8NI99 470 aa15.45■□□□□ 0.06
SHMT2-232ENST00000557487 TMEM163Q8TC26 289 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms