RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ANTXRLA6NF34 631 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ANKDD1BA6NHY2 528 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CGB1A6NKQ9 187 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 C2CD4DB7Z1M9 353 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 C9JVG2 144 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 H3BQ06 376 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 FXYD1O00168 92 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 RFXANKO14593 260 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SLC31A1O15431 190 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 RPSAP08865 295 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 ACP5P13686 325 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SDC1P18827 310 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CD22P20273 847 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PPIBP23284 216 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 FASP25445 335 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PSMA4P25789 261 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 GSTM2P28161 218 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 AKT2P31751 481 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 HPCAL1P37235 193 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 GRIA3P42263 894 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 BDKRB1P46663 353 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ERFP50548 548 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TPMTP51580 245 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CCR5P51681 352 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CLCN2P51788 898 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 DGKEP52429 567 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ADPRHP54922 357 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 KIAA1024LP59773 190 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TBPL1P62380 186 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MRPS22P82650 360 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 OCA2Q04671 838 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MTAPQ13126 283 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TDGQ13569 410 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TSTA3Q13630 321 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 DDX39BQ13838 428 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 FGL2Q14314 439 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PTGR1Q14914 329 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 RBBP5Q15291 538 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 DUOXA1Q1HG43 343 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 UAP1L1Q3KQV9 507 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TMEM35AQ53FP2 167 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SPANXN4Q5MJ08 99 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 C6orf10Q5SRN2 563 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 LRIF1Q5T3J3 769 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 GLYATQ6IB77 296 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SUSD1Q6UWL2 747 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ABRAXAS1Q6UWZ7 409 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 IZUMO2Q6UXV1 221 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 WASH2PQ6VEQ5 465 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ZNF852Q6ZMS4 543 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 IKBIPQ70UQ0 350 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 R3HCC1LQ7Z5L2 792 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 GPR180Q86V85 440 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 IFNEQ86WN2 208 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TRIM69Q86WT6 500 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PDSS2Q86YH6 399 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 KIAA2013Q8IYS2 634 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TMEM132CQ8N3T6 1108 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 KRTCAP2Q8N6L1 136 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 NATD1Q8N6N6 113 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PACRGLQ8N7B6 248 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ANKFN1Q8N957 763 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 FAM156AQ8NDB6 213 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PAPD5Q8NDF8 572 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 ABHD11Q8NFV4 315 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TTLQ8NG68 377 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 OR4K1Q8NGD4 311 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 OR8J2Q8NGG1 315 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 OR52E4Q8NGH9 312 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 OR5AR1Q8NGP9 310 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MAFAQ8NHW3 353 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 ZFP28Q8NHY6 868 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SNX33Q8WV41 574 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ZFPM2Q8WW38 1151 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 KLK6Q92876 244 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 EME1Q96AY2 570 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PPWD1Q96BP3 646 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 BIRC7Q96CA5 298 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 COQ8BQ96D53 544 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ERLEC1Q96DZ1 483 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MTERF3Q96E29 417 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 C11orf24Q96F05 449 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 APIPQ96GX9 242 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SLC45A3Q96JT2 553 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MRGPRX1Q96LB2 322 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PPM1MQ96MI6 270 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ZNF583Q96ND8 569 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CCDC115Q96NT0 180 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CAMK1GQ96NX5 476 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TSSK3Q96PN8 268 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 NELL2Q99435 816 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 AIF1LQ9BQI0 150 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SLC39A3Q9BRY0 314 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CENPKQ9BS16 269 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PHF7Q9BWX1 381 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 UGT2B28Q9BY64 529 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 RHBGQ9H310 441 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 GORASP2Q9H8Y8 452 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms