RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 TUBA3EQ6PEY2 450 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 OR2T11Q8NH01 316 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 C19orf60Q96EN9 201 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 CES1P1Q9UKY3 287 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 ERVK-19Q9WJR5 959 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 CCL27Q9Y4X3 112 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 COPG1Q9Y678 874 aaKnown RBP15.9■□□□□ 0.14
PSEN1-217ENST00000556533 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 ZNF462Q96JM2 2506 aa15.9■□□□□ 0.14
PSEN1-217ENST00000556533 TMEM114B3SHH9 223 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 WWP2O00308 870 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 SKAP2O75563 359 aaPredicted RBP15.89■□□□□ 0.13
PSEN1-217ENST00000556533 CPMP14384 443 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 DRD2P14416 443 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 CSNK2A2P19784 350 aaPredicted RBP15.89■□□□□ 0.13
PSEN1-217ENST00000556533 PTGER1P34995 402 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 SLC1A6P48664 564 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 WDR4P57081 412 aaKnown RBP15.89■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF763Q0D2J5 394 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 OR1C1Q15619 314 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 C6orf163Q5TEZ5 329 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 AGBL2Q5U5Z8 902 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF468Q5VIY5 522 aaPredicted RBP15.89■□□□□ 0.13
PSEN1-217ENST00000556533 SPINK14Q6IE38 97 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 GALNT18Q6P9A2 607 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 Q6ZSR9 355 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 LGI4Q8N135 537 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 GOLGA6L1Q8N7Z2 621 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF721Q8TF20 911 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 EXOSC8Q96B26 276 aaKnown RBP15.89■□□□□ 0.13
PSEN1-217ENST00000556533 FBXL20Q96IG2 436 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 ART5Q96L15 291 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 SIGLEC12Q96PQ1 595 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 RNF32Q9H0A6 362 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 KLHL1Q9NR64 748 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 UTS2RQ9UKP6 389 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 PCDHGA10Q9Y5H3 936 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 SPTA1P02549 2419 aa15.89■□□□□ 0.13
PSEN1-217ENST00000556533 PRAMEF2O60811 474 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 PEX11AO75192 247 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 ITGA10O75578 1167 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 OR2J2O76002 312 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 GRK2P25098 689 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 RPL38P63173 70 aaKnown RBP15.88■□□□□ 0.13
PSEN1-217ENST00000556533 RNF4P78317 190 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 HEPACAMQ14CZ8 416 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-217ENST00000556533 GALNT12Q8IXK2 581 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 TMEM156Q8N614 296 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 OR5L2Q8NGL0 311 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 SNRNP40Q96DI7 357 aaKnown RBP15.88■□□□□ 0.13
PSEN1-217ENST00000556533 C11orf24Q96F05 449 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-217ENST00000556533 BRINP2Q9C0B6 783 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 CXorf21Q9HAI6 301 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.88■□□□□ 0.13
PSEN1-217ENST00000556533 SIRT5Q9NXA8 310 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 LRFN1Q9P244 771 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 GIMAP2Q9UG22 337 aa15.88■□□□□ 0.13
PSEN1-217ENST00000556533 ATP6AP2A0A1C7CYW4 349 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 ATP6AP2O75787 350 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 SSTR4P31391 388 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 CYB561P49447 251 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 SSR4P51571 173 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF766Q5HY98 468 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 RNF111Q6ZNA4 994 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 HOMEZQ8IX15 550 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 HORMAD2Q8N7B1 307 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF781Q8N8C0 355 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 ADCY4Q8NFM4 1077 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 GFM2Q969S9 779 aaKnown RBP15.87■□□□□ 0.13
PSEN1-217ENST00000556533 CNRIP1Q96F85 164 aaPredicted RBP15.87■□□□□ 0.13
PSEN1-217ENST00000556533 PPP1R36Q96LQ0 422 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 C3orf30Q96M34 536 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 C5orf34Q96MH7 638 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 GAL3ST4Q96RP7 486 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 C20orf27Q9GZN8 174 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 GIMAP4Q9NUV9 329 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 ASF1BQ9NVP2 202 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 MYOTQ9UBF9 498 aa15.87■□□□□ 0.13
PSEN1-217ENST00000556533 YARS2Q9Y2Z4 477 aaKnown RBP15.87■□□□□ 0.13
PSEN1-217ENST00000556533 COL6A6A6NMZ7 2263 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 TMEM200CA6NKL6 621 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 LSM1O15116 133 aaKnown RBP15.86■□□□□ 0.13
PSEN1-217ENST00000556533 AKAP10O43572 662 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 IGKV3-11P04433 115 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 CT62P0C5K7 136 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 CD46P15529 392 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 PRPH2P23942 346 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 TACR1P25103 407 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 GALNSP34059 522 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 GSTM5P46439 218 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 HLCSP50747 726 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 RPL14P50914 215 aaKnown RBP15.86■□□□□ 0.13
PSEN1-217ENST00000556533 HK2P52789 917 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 DUSP2Q05923 314 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 BST1Q10588 318 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 KIAA0040Q15053 153 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 PDCD2Q16342 344 aaPredicted RBP15.86■□□□□ 0.13
PSEN1-217ENST00000556533 SPRED3Q2MJR0 410 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms