RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	DPY19L1	Q2PZI1	675 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	ZDHHC20	Q5W0Z9	365 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	AMZ2	Q86W34	360 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	OR2L5	Q8NG80	312 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	GPN1	Q9HCN4	374 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	FBXL12	Q9NXK8	326 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	ASIC5	Q9NY37	505 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	VNN3	Q9NY84	501 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	VPS29	Q9UBQ0	182 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	NUP50	Q9UKX7	468 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	PTPRD	P23468	1912 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	TRBC2	A0A5B9	178 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	MTRF1	O75570	445 aa	Known RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	GIMD1	P0DJR0	217 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	HMGA1	P17096	107 aa	Known RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	ZNF8	P17098	575 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	DAP	P51397	102 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	LRRC37A5P	Q49AS3	106 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	KIAA1614	Q5VZ46	1190 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	CRTC1	Q6UUV9	634 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	RNF175	Q8N4F7	328 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	MRPL43	Q8N983	215 aa	Known RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	PIGX	Q8TBF5	258 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	GRHL3	Q8TE85	626 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	SLC35A5	Q9BS91	424 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	CENPM	Q9NSP4	180 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	THUMPD1	Q9NXG2	353 aa	Known RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	CLEC4E	Q9ULY5	219 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029		A0A0G2JPF8	293 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	C5orf51	A6NDU8	294 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	HNRNPCL3	B7ZW38	293 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	LAT	O43561	262 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	HNRNPCL4	P0DMR1	293 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	PGAM2	P15259	253 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	VAMP1	P23763	118 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	RAB8A	P61006	207 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	TMEM115	Q12893	351 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	ZNF155	Q12901	538 aa	Predicted RBP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	SLBP	Q14493	270 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	C10orf111	Q8N326	155 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	SLC37A3	Q8NCC5	494 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	UFD1	Q92890	307 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	COQ8B	Q96D53	544 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	TPT1P8	Q9HAU6	139 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	TCF7L1	Q9HCS4	588 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	IL1RAP	Q9NPH3	570 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	PPT2	Q9UMR5	302 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	MAU2	Q9Y6X3	613 aa		11.74	□□□□□ -0.53
TMPO-212	ENST00000556029	KRBA1	A5PL33	1030 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	URAD	A6NGE7	173 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ANXA2P2	A6NMY6	339 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	VIP	P01282	170 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ANXA2	P07355	339 aa	Known RBP	11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CCR7	P32248	378 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SCARB2	Q14108	478 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	LRIF1	Q5T3J3	769 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	METTL2B	Q6P1Q9	378 aa	Known RBP	11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	HSDL2	Q6YN16	418 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SLC16A12	Q6ZSM3	486 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	OR52E4	Q8NGH9	312 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	FIBIN	Q8TAL6	211 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	FRMD6	Q96NE9	622 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	EHD1	Q9H4M9	534 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	NECTIN3	Q9NQS3	549 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CHST10	O43529	356 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SOCS5	O75159	536 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ANXA8	P13928	327 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SCGB2B2	Q4G0G5	96 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	BTLA	Q7Z6A9	289 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	LMNTD1	Q8N9Z9	388 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	AQP11	Q8NBQ7	271 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	LCN9	Q8WX39	176 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SMPDL3B	Q92485	455 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SLC25A36	Q96CQ1	311 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	FUZ	Q9BT04	418 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	WRB	O00258	174 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CLK3	P49761	638 aa	Known RBP	11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	SNRPD2	P62316	118 aa	Known RBP	11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CTF1	Q16619	201 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	JAZF1	Q86VZ6	243 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CALHM3	Q86XJ0	350 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	PLCZ1	Q86YW0	608 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	CLECL1	Q8IZS7	167 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	PIK3R3	Q92569	461 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	FKBP10	Q96AY3	582 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	KCTD7	Q96MP8	289 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	IL17F	Q96PD4	163 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ALPK1	Q96QP1	1244 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	NKX2-4	Q9H2Z4	354 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	EXO5	Q9H790	373 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ERVK13-1	Q9NX77	482 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	MAN2B2	Q9Y2E5	1009 aa		11.73	□□□□□ -0.53
TMPO-212	ENST00000556029	ATG2B	Q96BY7	2078 aa		11.72	□□□□□ -0.53
TMPO-212	ENST00000556029		A0A1W2PP55	124 aa		11.72	□□□□□ -0.53
TMPO-212	ENST00000556029		J3QLW9	94 aa		11.72	□□□□□ -0.53
TMPO-212	ENST00000556029	GAPDHS	O14556	408 aa	Predicted RBP	11.72	□□□□□ -0.53
TMPO-212	ENST00000556029	ARHGEF15	O94989	841 aa		11.72	□□□□□ -0.53
TMPO-212	ENST00000556029	ZNF19	P17023	458 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms