RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ELAVL1Q15717 326 aaKnown RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 MAPKAPK3Q16644 382 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 MPEG1Q2M385 716 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CRTC2Q53ET0 693 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 RAB43Q86YS6 212 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 DNAJB8Q8NHS0 232 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 NUDT8Q8WV74 236 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 DAZLQ92904 295 aaKnown RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 RIT1Q92963 219 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TSLPQ969D9 159 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 AMDHD1Q96NU7 426 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 GLIPR2Q9H4G4 154 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 ADAP2Q9NPF8 381 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 NDUFAF1Q9Y375 327 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CLCA3PQ9Y6N3 262 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 MED19A0JLT2 244 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 CAPN14A8MX76 684 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 C9JVG2 144 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 PLOD2O00469 737 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 NR5A2O00482 541 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 RRP8O43159 456 aaKnown RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 KLK10O43240 276 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 TRPC1P48995 793 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 FOXL2P58012 376 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 RPS18P62269 152 aaKnown RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 KRT72Q14CN4 511 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 TLR1Q15399 786 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF750Q32MQ0 723 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 COQ5Q5HYK3 327 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 FAAH2Q6GMR7 532 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 FITM2Q8N6M3 262 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 MORN4Q8NDC4 146 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 OR14A16Q8NHC5 309 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 GOT1L1Q8NHS2 421 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 PSMA8Q8TAA3 256 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 SUN3Q8TAQ9 357 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF675Q8TD23 568 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 CIDECQ96AQ7 238 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 VPS33AQ96AX1 596 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 PPWD1Q96BP3 646 aaKnown RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 ITCHQ96J02 903 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 CCDC115Q96NT0 180 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 CCNL2Q96S94 520 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 LPAR4Q99677 370 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 TUBB6Q9BUF5 446 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF700Q9H0M5 742 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 CXorf21Q9HAI6 301 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 SLAMF7Q9NQ25 335 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 PNO1Q9NRX1 252 aaKnown RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-221ENST00000555773 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 HS3ST3B1Q9Y662 390 aa11.66□□□□□ -0.54
SHMT2-221ENST00000555773 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 MYOCOSA0A1B0GUC4 107 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 BBIP1A8MTZ0 92 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 C17orf105B2RV13 164 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PEX12O00623 359 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 SOCS6O14544 535 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ANGPT2O15123 496 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PLOD3O60568 738 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 BCAS2O75934 225 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-221ENST00000555773 KRT34O76011 436 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ICAM2P13598 275 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 NT5EP21589 574 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 OTX2P32243 289 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 EIF2S3P41091 472 aaKnown RBP11.65□□□□□ -0.54
SHMT2-221ENST00000555773 SPRED3Q2MJR0 410 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PRICKLE4Q2TBC4 344 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 TIGD2Q4W5G0 525 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 C6orf163Q5TEZ5 329 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 FAM180BQ6P0A1 224 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 GK5Q6ZS86 529 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 LANCL3Q6ZV70 420 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 NDUFAF7Q7L592 441 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF551Q7Z340 670 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PPP1R32Q7Z5V6 425 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 VASH2Q86V25 355 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 GALNT12Q8IXK2 581 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 OR11G2Q8NGC1 345 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ADAMTS17Q8TE56 1095 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 THAP4Q8WY91 577 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 GTF2H4Q92759 462 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 CTHRC1Q96CG8 243 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ELP4Q96EB1 424 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 NAF1Q96HR8 494 aaKnown RBP11.65□□□□□ -0.54
SHMT2-221ENST00000555773 ART5Q96L15 291 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 TAS2R9Q9NYW1 312 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PTGFRNQ9P2B2 879 aa11.65□□□□□ -0.54
SHMT2-221ENST00000555773 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms