RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NT5EP21589 574 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 NME5P56597 212 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 UFM1P61960 85 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 CXADRP78310 365 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 SF3A3Q12874 501 aaKnown RBP eCLIP13.35□□□□□ -0.275e-6■■□□□ 14.3
CHD8-208ENST00000555301 SPRED3Q2MJR0 410 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 DEFB109BQ30KR1 87 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ZNF750Q32MQ0 723 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 DCAF10Q5QP82 559 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ANKRD26P1Q6NSI1 321 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 CCDC116Q8IYX3 515 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 CLEC1AQ8NC01 280 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 MORN4Q8NDC4 146 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 OR7A2PQ8NGA2 310 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
CHD8-208ENST00000555301 C10orf82Q8WW14 230 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 RIT1Q92963 219 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 PPWD1Q96BP3 646 aaKnown RBP13.35□□□□□ -0.27
CHD8-208ENST00000555301 COQ8BQ96D53 544 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ZBED6CLQ96FA7 236 aaPredicted RBP13.35□□□□□ -0.27
CHD8-208ENST00000555301 ART5Q96L15 291 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 IMMP1LQ96LU5 166 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 DUSP26Q9BV47 211 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
CHD8-208ENST00000555301 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ZNF160Q9HCG1 818 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 TMEM45AQ9NWC5 275 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 SCN3AQ9NY46 2000 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 SEC16AO15027 2179 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 CELSR3Q9NYQ7 3312 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 A0A1W2PS29 197 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 ARGFXA6NJG6 315 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 A8MUA0 341 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 SNX3O60493 162 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 SLITRK5O94991 958 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 KIR3DL1P43629 444 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 NCBP2P52298 156 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHD8-208ENST00000555301 SLC26A5P58743 744 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 AIMP2Q13155 320 aaKnown RBP13.34□□□□□ -0.27
CHD8-208ENST00000555301 SQLEQ14534 574 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 ZNF385BQ569K4 471 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 GALNT12Q8IXK2 581 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 VPS37AQ8NEZ2 397 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 OR8J2Q8NGG1 315 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 M1APQ8TC57 530 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 ACSS1Q9NUB1 689 aaPredicted RBP13.34□□□□□ -0.27
CHD8-208ENST00000555301 PPIEQ9UNP9 301 aaKnown RBP13.34□□□□□ -0.27
CHD8-208ENST00000555301 COPG1Q9Y678 874 aaKnown RBP13.34□□□□□ -0.27
CHD8-208ENST00000555301 APC2O95996 2303 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 FRYQ5TBA9 3013 aa13.34□□□□□ -0.27
CHD8-208ENST00000555301 IL6P05231 212 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 SERPINA7P05543 415 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 LAMP1P11279 417 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 GPX3P22352 226 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 S100A3P33764 101 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
CHD8-208ENST00000555301 PGDP52209 483 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
CHD8-208ENST00000555301 MAP4K2Q12851 820 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 MLC1Q15049 377 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 PRICKLE4Q2TBC4 344 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 BTBD16Q32M84 506 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 PGS1Q32NB8 556 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 ANXA8L1Q5VT79 327 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 PAOXQ6QHF9 649 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 APLFQ8IW19 511 aaPredicted RBP13.33□□□□□ -0.28
CHD8-208ENST00000555301 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
CHD8-208ENST00000555301 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 SLC2A12Q8TD20 617 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 ZNF675Q8TD23 568 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 APOBEC4Q8WW27 367 aaKnown RBP13.33□□□□□ -0.28
CHD8-208ENST00000555301 ERP27Q96DN0 273 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 FBXL20Q96IG2 436 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 TEX37Q96LM6 180 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 ING2Q9H160 280 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 GLIPR2Q9H4G4 154 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 MMP25Q9NPA2 562 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHD8-208ENST00000555301 COPS7AQ9UBW8 275 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.28
CHD8-208ENST00000555301 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 RNASET2O00584 256 aaKnown RBP13.32□□□□□ -0.28
CHD8-208ENST00000555301 CCDC22O60826 627 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 FAM107AO95990 144 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 ITGB2P05107 769 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 PGRP06401 933 aa13.32□□□□□ -0.28
CHD8-208ENST00000555301 IFI6P09912 130 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms