RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 LIPJQ5W064 366 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 BNIPLQ7Z465 357 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 BANPQ8N9N5 519 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 CNNM3Q8NE01 707 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 FBXO25Q8TCJ0 367 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 COG3Q96JB2 828 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 C18orf12Q96KH6 178 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 RCHY1Q96PM5 261 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 IWS1Q96ST2 819 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 ATF6BQ99941 703 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 CBWD1Q9BRT8 395 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 LRRC61Q9BV99 259 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 KRT23Q9C075 422 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 SIRPDQ9H106 197 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 MUTYHQ9UIF7 546 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 MTF2Q9Y483 593 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 KIF7Q2M1P5 1343 aa4.46□□□□□ -1.69
CKS1BP1-201ENST00000555221 CUX2O14529 1486 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 BAZ1BQ9UIG0 1483 aaKnown RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 A0A0J9YWU9 116 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF724A8MTY0 619 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 A8MXK9 166 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 PDHXO00330 501 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 GNSP15586 552 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 OXTRP30559 389 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 ID1P41134 155 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 MTIF2P46199 727 aaKnown RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 NLRP11P59045 1033 aaKnown RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 KLF5Q13887 457 aaPredicted RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 HAGHQ16775 308 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 FAM182AQ5T1J6 154 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 DOK6Q6PKX4 331 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 METTL7BQ6UX53 244 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF497Q6ZNH5 498 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 GPR142Q7Z601 462 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 YRDCQ86U90 279 aaKnown RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 LRRC17Q8N6Y2 441 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 ANKRD20A12PQ8NF67 263 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR1B1Q8NGR6 318 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 C14orf79Q96F83 325 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 C16orf58Q96GQ5 468 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 KCNK16Q96T55 309 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 JPH2Q9BR39 696 aaPredicted RBP4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 PANK3Q9H999 370 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC25A19Q9HC21 320 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 PLA2G4CQ9UP65 541 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 PLEKHA6Q9Y2H5 1048 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 ATG4BQ9Y4P1 393 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 AUP1Q9Y679 476 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 PRSS21Q9Y6M0 314 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 UBE4BO95155 1302 aa4.46□□□□□ -1.7
CKS1BP1-201ENST00000555221 TRGV8A0A0C4DH27 118 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TRBV5-4A0A0C4DH59 114 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TMEM89A2RUT3 159 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 SH2D1BO14796 132 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR6B1O95007 311 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 POP4O95707 220 aaKnown RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 PDGFBP01127 241 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 PROS1P07225 676 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 RABIFP47224 123 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TKTL1P51854 596 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF131P52739 623 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 NDUFV3P56181 108 aaKnown RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 FCN2Q15485 313 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 POM121L1PQ3SYA9 428 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TTC31Q49AM3 519 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 IL23RQ5VWK5 629 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 RHBDD2Q6NTF9 364 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 STEAP1BQ6NZ63 245 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 NUFIP2Q7Z417 695 aaKnown RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 CATSPER3Q86XQ3 398 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 LMNTD2Q8IXW0 634 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF781Q8N8C0 355 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 MLKLQ8NB16 471 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR1K1Q8NGR3 316 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 MIPOL1Q8TD10 442 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TMEM37Q8WXS4 190 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 P3H4Q92791 437 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 PNPLA2Q96AD5 504 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 NABP1Q96AH0 204 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 CAPNS2Q96L46 248 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 SAMD8Q96LT4 415 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF599Q96NL3 588 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 CHCHD5Q9BSY4 110 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TRIM15Q9C019 465 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TUBB1Q9H4B7 451 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 DCTPP1Q9H773 170 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 GTSE1Q9NYZ3 720 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 EIF3KQ9UBQ5 218 aaKnown RBP4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 TUBGCP4Q9UGJ1 667 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 MGAT4AQ9UM21 535 aa4.45□□□□□ -1.7
CKS1BP1-201ENST00000555221 IGHV3OR16-10A0A075B7F0 116 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 K7EQG2 157 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms