RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 E2F3O00716 465 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GJB5O95377 273 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 KCNC1P48547 511 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 TBPL1P62380 186 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 FLYWCH1Q4VC44 716 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 RANBP10Q6VN20 620 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ABHD11Q8NFV4 315 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LRR1Q96L50 414 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 SORT1Q99523 831 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 HAPLN2Q9GZV7 340 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GPRC5BQ9NZH0 403 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 SLC22A31A6NKX4 558 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GKN3PP0CG01 181 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 NCS1P62166 190 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 NUP43Q8NFH3 380 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 CAPNS2Q96L46 248 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 RGCCQ9H4X1 137 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 KCNK13Q9HB14 408 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 TEX13CA0A0J9YWL9 993 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 H3BMQ9 156 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LATS1O95835 1130 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ADH1BP00325 375 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 PET100P0DJ07 73 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ACRP10323 421 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GCGRP47871 477 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 SOX2P48431 317 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF33BQ06732 778 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LMAN2Q12907 356 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 OR10T2Q8NGX3 314 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 IRF7Q92985 503 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
VTI1B-204ENST00000554659 COG8Q96MW5 612 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
VTI1B-204ENST00000554659 C1orf226A1L170 272 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 AGAP5A6NIR3 686 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 B4GALT2O60909 372 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 PLATP00750 562 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 SFTPBP07988 381 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 H2AFB2P0C5Z0 115 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GDI1P31150 447 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM69Q5SWH9 247 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 HCAR2Q8TDS4 363 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 PNPLA2Q96AD5 504 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GMLQ99445 158 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ABCG5Q9H222 651 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ERVK13-1Q9NX77 482 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 BORCS7-ASMTA0A0B4J1R7 106 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 HTR3EA5X5Y0 456 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 M0R129 80 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 LRRTM2O43300 516 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 GPR32O75388 356 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 DRD2P14416 443 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ACTA2P62736 377 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ACTG2P63267 376 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 UGT2A3Q6UWM9 527 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 METTL25Q8N6Q8 603 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF709Q8N972 641 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 OR52N2Q8NGI0 321 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 OR6N2Q8NGY6 317 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 DPCDQ9BVM2 203 aaPredicted RBP13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ARL6Q9H0F7 186 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ERVK-19Q9WJR5 959 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF623O75123 536 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ADH7P40394 386 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 BMXP51813 675 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 RAB5BP61020 215 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 GSTM4Q03013 218 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 COL28A1Q2UY09 1125 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 SLC9B2Q86UD5 537 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 RBP7Q96R05 134 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 G6PC3Q9BUM1 346 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 GSTO2Q9H4Y5 243 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 FUOMA2VDF0 154 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 GTF2F2P13984 249 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PTNP21246 168 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 KEAP1Q14145 624 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 AMZ1Q400G9 498 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms