RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PINLYPA6NC86 204 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PABPN1LA6NDY0 278 aaKnown RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 TRPC5OSA6NMA1 111 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 KIR3DP1A8MWS1 328 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 E9PLN8 166 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PSMD12O00232 456 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF195O14628 629 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PEX1O43933 1283 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 HS6ST1O60243 411 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CCDC22O60826 627 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 MYO1DO94832 1006 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 SUPT7LO94864 414 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 WDR47O94967 919 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 GGT5P36269 586 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 HNMTP50135 292 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 AQP5P55064 265 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PKNOX1P55347 436 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 GPR85P60893 370 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 BTN3A2P78410 334 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 LCP2Q13094 533 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 METTL21CQ5VZV1 264 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CYP4Z2PQ8N1L4 340 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 FAM47BQ8NA70 645 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 B3GNT7Q8NFL0 401 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 C16orf52Q8NHV5 167 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF483Q8TF39 744 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 NCLNQ969V3 563 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 RHBDF1Q96CC6 855 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 LRRC37BQ96QE4 947 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CSF3RQ99062 836 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 TREX2Q9BQ50 279 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 VKORC1Q9BQB6 163 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 TMEM79Q9BSE2 394 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 CCDC28BQ9BUN5 200 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 ENKD1Q9H0I2 346 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF395Q9H8N7 513 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 LIN28AQ9H9Z2 209 aaKnown RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PLSCR2Q9NRY7 297 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 DEPPQ9NTK1 212 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PNPOQ9NVS9 261 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PTBP2Q9UKA9 531 aaKnown RBP9.83□□□□□ -0.84
SHMT2-215ENST00000554656 PCTPQ9UKL6 214 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 KCNE2Q9Y6J6 123 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 SPG11Q96JI7 2443 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 A0A1B0GTH9 108 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 MYOCOSA0A1B0GUC4 107 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 LRIT2A6NDA9 550 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 URADA6NGE7 173 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 FCHO1O14526 889 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 TFECO14948 347 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 TAPBPO15533 448 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ERI3O43414 337 aaKnown RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 HNRNPCL1O60812 293 aaKnown RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ITGA10O75578 1167 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ATP5HO75947 161 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CHRNGP07510 517 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CD22P20273 847 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CERS1P27544 350 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CLCN2P51788 898 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 RAB38P57729 211 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 IRX1P78414 480 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CLCQ05315 142 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 TBCCQ15814 346 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ADPRMQ3LIE5 342 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 GALNTL6Q49A17 601 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 FBXO48Q5FWF7 155 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 EMC4Q5J8M3 183 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 SH2D4BQ5SQS7 431 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 EPGNQ6UW88 154 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CLNKQ7Z7G1 428 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CLYBLQ8N0X4 340 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ZFP62Q8NB50 900 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 POGLUT1Q8NBL1 392 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 OR52N2Q8NGI0 321 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 FAM57AQ8TBR7 257 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 EXT2Q93063 718 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 TMEM125Q96AQ2 219 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 SDCCAG3Q96C92 435 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 VMP1Q96GC9 406 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF382Q96SR6 550 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 CCT7Q99832 543 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 EGFL8Q99944 293 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 PFDN4Q9NQP4 134 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 NPDC1Q9NQX5 325 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 SAR1AQ9NR31 198 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 PRTFDC1Q9NRG1 225 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 PNO1Q9NRX1 252 aaKnown RBP9.82□□□□□ -0.84
SHMT2-215ENST00000554656 HEY2Q9UBP5 337 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 ZDHHC2Q9UIJ5 367 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 PPT2Q9UMR5 302 aa9.82□□□□□ -0.84
SHMT2-215ENST00000554656 NCF1BA6NI72 391 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 NCF1CA8MVU1 366 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-215ENST00000554656 CYR61O00622 381 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms