RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SERPINA11Q86U17 422 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 PIGZQ86VD9 579 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 TMEM173Q86WV6 379 aaPredicted RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 GPSM1Q86YR5 675 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 PSTKQ8IV42 348 aaKnown RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SLC39A11Q8N1S5 342 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 CAMKVQ8NCB2 501 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 RBM15BQ8NDT2 890 aaKnown RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 OR4N2Q8NGD1 307 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 OR52M1Q8NGK5 317 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 OR13C2Q8NGS9 318 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 MIPOL1Q8TD10 442 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 AGAP11Q8TF27 550 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 INPP5DQ92835 1189 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 HDAC11Q96DB2 347 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 ZNF560Q96MR9 790 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SPATA13Q96N96 652 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 NECTIN4Q96NY8 510 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 DDX50Q9BQ39 737 aaKnown RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 CACNG6Q9BXT2 260 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 DUSP16Q9BY84 665 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 B3GNT4Q9C0J1 378 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 LHPPQ9H008 270 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SNX25Q9H3E2 840 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 POMKQ9H5K3 350 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 DENND2DQ9H6A0 471 aaPredicted RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SYTL2Q9HCH5 934 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 TMEM30AQ9NV96 361 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 ARHGEF38Q9NXL2 777 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 WSB2Q9NYS7 404 aaPredicted RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SPASTQ9UBP0 616 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 TDRKHQ9Y2W6 561 aaKnown RBP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 PLLPQ9Y342 182 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SF3B1O75533 1304 aaKnown RBP eCLIP4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 NUP205Q92621 2012 aa4.94□□□□□ -1.62
MTHFD1-206ENST00000554353 SHROOM3Q8TF72 1996 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 A0A096LPK6 155 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 LOC100653049A0A140TA62 436 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 OOEPA6NGQ2 149 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ZNF814B7Z6K7 855 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 HHLA1C9JL84 531 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM72CH0Y354 149 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 STMND1H3BQB6 276 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 E2F3O00716 465 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 HSPB6O14558 160 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CYB561D2O14569 222 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CASC3O15234 703 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CNOT3O75175 753 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 KRT34O76011 436 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 SIX3O95343 332 aaPredicted RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 TOP3BO95985 862 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 MT-ATP6P00846 226 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 MLNP12872 115 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 EPCAMP16422 314 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 EDN2P20800 178 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ACAT1P24752 427 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ALDH4A1P30038 563 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ALDH3A1P30838 453 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FDFT1P37268 417 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 GPR12P47775 334 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FASLGP48023 281 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 GLUD2P49448 558 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 RAB28P51157 221 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CLCN5P51795 746 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 GTF2A1P52655 376 aaPredicted RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 PRRX1P54821 245 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CDK16Q00536 496 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ADIGQ0VDE8 80 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 OVGP1Q12889 678 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 IL24Q13007 206 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 GAMTQ14353 236 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ZMYND11Q15326 602 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CLPPQ16740 277 aaPredicted RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FUT11Q495W5 492 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 ACCSLQ4AC99 568 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 TEX44Q53QW1 395 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 STXBP5Q5T5C0 1151 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM72AQ5TYM5 149 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM91A1Q658Y4 838 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM72DQ6L9T8 149 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 LRRC8BQ6P9F7 803 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CD300LGQ6UXG3 332 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 PACS1Q6VY07 963 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 RBPMS2Q6ZRY4 209 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM72BQ86X60 149 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 FAM131BQ86XD5 332 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 TMC8Q8IU68 726 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 UBALD2Q8IYN6 164 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 MINDY1Q8N5J2 469 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 AADATQ8N5Z0 425 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 LINC00469Q8N7U9 141 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 KDM1BQ8NB78 822 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 GANCQ8TET4 914 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 TFB1MQ8WVM0 346 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 HTR3CQ8WXA8 447 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 METTL21AQ8WXB1 218 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 MSI2Q96DH6 328 aaKnown RBP4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 IGSF21Q96ID5 467 aa4.93□□□□□ -1.62
MTHFD1-206ENST00000554353 CAMK1GQ96NX5 476 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms