RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 RNF44Q7L0R7 432 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C6orf120Q7Z4R8 191 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TAF8Q7Z7C8 310 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 GKN2Q86XP6 184 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 RNF130Q86XS8 419 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 UBALD2Q8IYN6 164 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CARFQ8N187 725 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SLC22A18ASQ8N1D0 253 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TSPAN14Q8NG11 270 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CYGBQ8WWM9 190 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 NR4A3Q92570 626 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CIDECQ96AQ7 238 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SMIM10Q96HG1 83 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SPACA7Q96KW9 195 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C7orf34Q96L11 122 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 AMDHD1Q96NU7 426 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BBS4Q96RK4 519 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 PSD2Q9BQI7 771 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BTBD2Q9BX70 525 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 NPLQ9BXD5 320 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM4Q9C037 500 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CXorf36Q9H7Y0 433 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM45Q9H8W5 580 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C3orf14Q9HBI5 128 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BCL2L10Q9HD36 194 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 GPATCH2Q9NW75 528 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CALML5Q9NZT1 146 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 P2RX2Q9UBL9 471 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 RAPGEFL1Q9UHV5 662 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 PILRAQ9UKJ1 303 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 UTS2RQ9UKP6 389 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SLC22A7Q9Y694 548 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 V9GYQ6 96 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 GSAPA4D1B5 854 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 OR6C74A6NCV1 312 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 OR5K3A6NET4 321 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 LILRA5A6NI73 299 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 DUXAA6NLW8 204 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FAM170BA6NMN3 283 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 RTCAO00442 366 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 B3GALT2O43825 422 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SH3BP5O60239 455 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SRPX2O60687 465 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 MRPS14O60783 128 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 DNAJB5O75953 348 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 EML2O95834 649 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FHP07954 510 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 TFPTP0C1Z6 253 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SMIM18P0DKX4 95 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 NR2F6P10588 404 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ANXA8P13928 327 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ETS2P15036 469 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 RHCEP18577 417 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CD72P21854 359 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CD38P28907 300 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 RYKP34925 604 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ALDH9A1P49189 494 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 HMGA2P52926 109 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SMIM11AP58511 58 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CXCR4P61073 352 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ESRRGP62508 458 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CSNK2BP67870 215 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 TNFRSF17Q02223 184 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FZD5Q13467 585 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 TP53BP2Q13625 1128 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SPIDRQ14159 915 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 DOC2BQ14184 412 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 OTUD3Q5T2D3 398 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 KDM4DQ6B0I6 523 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FBXO42Q6P3S6 717 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF793Q6ZN11 406 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 VN1R4Q7Z5H5 301 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CYP4Z1Q86W10 505 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 PLD3Q8IV08 490 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 C8orf59Q8N0T1 100 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 LINC00471Q8N535 108 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 PIK3C3Q8NEB9 887 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 BBS10Q8TAM1 723 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FAM110BQ8TC76 370 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ADAMTS18Q8TE60 1221 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SLC37A2Q8TED4 501 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 PMM1Q92871 262 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 EXOSC8Q96B26 276 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CLDN23Q96B33 292 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 DGCR14Q96DF8 476 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 ORAI3Q9BRQ5 295 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SORBS1Q9BX66 1292 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 RAB33BQ9H082 229 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CXorf56Q9H5V9 222 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 VCX3AQ9NNX9 186 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CD93Q9NPY3 652 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms