RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 WIPF1O43516 503 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 C1QAP02745 245 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 SERPIND1P05546 499 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 TRPC1P48995 793 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 NPY2RP49146 381 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 DUSP8Q13202 625 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 MPEG1Q2M385 716 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 VASNQ6EMK4 673 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 KIAA0930Q6ICG6 404 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 C3orf62Q6ZUJ4 267 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 PM20D2Q8IYS1 436 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 OTUD6BQ8N6M0 293 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 ANKRD53Q8N9V6 530 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 CD200R1Q8TD46 325 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 KCNJ9Q92806 393 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 MARK4Q96L34 752 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 CCL19Q99731 98 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 CALHM2Q9HA72 323 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 PLAC1Q9HBJ0 212 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 PRTFDC1Q9NRG1 225 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 ZNF701Q9NV72 531 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 INTS10Q9NVR2 710 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 BFARQ9NZS9 450 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 VTI1BQ9UEU0 232 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 TBK1Q9UHD2 729 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 ADAMTS6Q9UKP5 1117 aa10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 BOKQ9UMX3 212 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-202ENST00000552829 YLPM1P49750 1951 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 URADA6NGE7 173 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 CASKO14936 926 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 RGS16O15492 202 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 SERPINA6P08185 405 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 PGAM1P18669 254 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 GCAP28676 217 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 HNF4AP41235 474 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 PCYT1AP49585 367 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 GYS2P54840 703 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 CBX1P83916 185 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 TBL3Q12788 808 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 FOXF2Q12947 444 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 CTBP1Q13363 440 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 BMPR2Q13873 1038 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 SF3B4Q15427 424 aaKnown RBP eCLIP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 NHSL2Q5HYW2 709 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 AGBL2Q5U5Z8 902 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 TRMT10BQ6PF06 316 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 LIX1Q8N485 282 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 C9orf106Q8NAJ2 232 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 TRPV3Q8NET8 790 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 OR5L2Q8NGL0 311 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 OR56A3Q8NH54 315 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 OR14A16Q8NHC5 309 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 DAZLQ92904 295 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 LRRC39Q96DD0 335 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 WDYHV1Q96HA8 205 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 ATP6V1G3Q96LB4 118 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 GPR21Q99679 349 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 OCSTAMPQ9BR26 566 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 NPLQ9BXD5 320 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 PARVBQ9HBI1 364 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 C6orf203Q9P0P8 240 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 SLC17A6Q9P2U8 582 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 IKBKGQ9Y6K9 419 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 CLCA3PQ9Y6N3 262 aa10.4□□□□□ -0.74
SUPT16H-202ENST00000552829 C15orf38-AP3S2A0A0A6YYH1 394 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 SYNDIG1LA6NDD5 238 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CXorf49A8MYA2 514 aaPredicted RBP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CYR61O00622 381 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TRIM3O75382 744 aaPredicted RBP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TMIGD3P0DMS9 266 aaPredicted RBP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 NID1P14543 1247 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 STX2P32856 288 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 MC3RP41968 323 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 RAB38P57729 211 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 KCNJ2P63252 427 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 REEP5Q00765 189 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TIAL1Q01085 375 aaKnown RBP eCLIP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 DMTNQ08495 405 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TNK1Q13470 666 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CRYMQ14894 314 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 KBTBD12Q3ZCT8 623 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 SPANXN3Q5MJ09 141 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 STEAP4Q687X5 459 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 NEPROQ6NW34 567 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CTAGE3PQ8IX95 158 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF595Q8IYB9 648 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CPNE9Q8IYJ1 553 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TBC1D19Q8N5T2 526 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 PPM1NQ8N819 430 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 QRFPRQ96P65 431 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 PAFAH2Q99487 392 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 TMEM109Q9BVC6 243 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 ROPN1BQ9BZX4 212 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms