RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FUT7Q11130 342 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 MAP4K2Q12851 820 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 KLRB1Q12918 225 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 MEP1AQ16819 746 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 GALNTL6Q49A17 601 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 HSP90B2PQ58FF3 399 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ACER2Q5QJU3 275 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ABHD17BQ5VST6 288 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 DGAT2L6Q6ZPD8 337 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 RGS9BPQ6ZS82 235 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 RPS19BP1Q86WX3 136 aaKnown RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 MMP21Q8N119 569 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 AMER2Q8N7J2 671 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 LRRC8CQ8TDW0 803 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 CKAP2Q8WWK9 683 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 TUBGCP3Q96CW5 907 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ERP27Q96DN0 273 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 DEFB126Q9BYW3 111 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 SLC35C2Q9NQQ7 365 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDX54-203ENST00000546869 PTGFRNQ9P2B2 879 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ZNF223Q9UK11 482 aaPredicted RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 EXO1Q9UQ84 846 aaKnown RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 ATMQ13315 3056 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 MYOCOSA0A1B0GUC4 107 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 MYO1GB0I1T2 1018 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 ERAL1O75616 437 aaKnown RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 SLITRK5O94991 958 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 MPIP34949 423 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 MLF1P58340 268 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 C21orf58P58505 322 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 PDE7AQ13946 482 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 B3GNTL1Q67FW5 361 aaPredicted RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 OGFOD2Q6N063 350 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 Q6ZS92 163 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 LARP4Q71RC2 724 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX54-203ENST00000546869 TICAM1Q8IUC6 712 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 GALNT12Q8IXK2 581 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 ARFGAP2Q8N6H7 521 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 RBMXL3Q8N7X1 1067 aaKnown RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 OR7G1Q8NGA0 311 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 OR5L2Q8NGL0 311 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 ZNF675Q8TD23 568 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 EGLN2Q96KS0 407 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 NPAS2Q99743 824 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 OR8D2Q9GZM6 311 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 TRIM45Q9H8W5 580 aaPredicted RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 ZBTB20Q9HC78 741 aaPredicted RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 GIMAP4Q9NUV9 329 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 COPS7AQ9UBW8 275 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 ZNF639Q9UID6 485 aa13.47□□□□□ -0.25
DDX54-203ENST00000546869 EIF3LQ9Y262 564 aaKnown RBP13.47□□□□□ -0.25
DDX54-203ENST00000546869 DYTNA2CJ06 578 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 TMEM200CA6NKL6 621 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 OR6C76A6NM76 312 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 EIF4E1BA6NMX2 242 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 A8MUI8 341 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 B8ZZF3 427 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 IFI6P09912 130 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 DDX5P17844 614 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 S1PR1P21453 382 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 TRHRP34981 398 aaPredicted RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 RPL3P39023 403 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 SLC37A1P57057 533 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 ERVK-8P63133 956 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 RNF4P78317 190 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 MGAT2Q10469 447 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 IL23RQ5VWK5 629 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 LINC00696Q6ZRV3 163 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 CRLF3Q8IUI8 442 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 FAM9CQ8IZT9 166 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 ZNF843Q8N446 348 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 KIF2BQ8N4N8 673 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 TEX19Q8NA77 164 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 DYDC1Q8WWB3 177 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 PNPLA2Q96AD5 504 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 NUF2Q9BZD4 464 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 MIEF1Q9NQG6 463 aa13.46□□□□□ -0.25
DDX54-203ENST00000546869 NOP53Q9NZM5 478 aaKnown RBP13.46□□□□□ -0.25
DDX54-203ENST00000546869 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms