RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 LIN28AQ9H9Z2 209 aaKnown RBP21.56■■□□□ 1.04
CHFR-222ENST00000544093 PLEKHB1Q9UF11 243 aaPredicted RBP21.56■■□□□ 1.04
CHFR-222ENST00000544093 PCDHA9Q9Y5H5 950 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 NPIPA5E9PKD4 350 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 PGRMC2O15173 223 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 PEX1O43933 1283 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 OR6B1O95007 311 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 MEOX1P50221 254 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 ERVK-8P63133 956 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 SRSF11Q05519 484 aaKnown RBP21.55■■□□□ 1.04
CHFR-222ENST00000544093 ZNF267Q14586 743 aaPredicted RBP21.55■■□□□ 1.04
CHFR-222ENST00000544093 PIGGQ5H8A4 983 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 MDGA2Q7Z553 956 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 GALNT12Q8IXK2 581 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 GHDCQ8N2G8 530 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 C1orf52Q8N6N3 182 aaKnown RBP21.55■■□□□ 1.04
CHFR-222ENST00000544093 CCDC63Q8NA47 563 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 ZFP62Q8NB50 900 aaPredicted RBP21.55■■□□□ 1.04
CHFR-222ENST00000544093 AGAP11Q8TF27 550 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 MAGED4Q96JG8 741 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 IQCGQ9H095 443 aaKnown RBP21.55■■□□□ 1.04
CHFR-222ENST00000544093 MID1IP1Q9NPA3 183 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 MCM8Q9UJA3 840 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 NPIPA1Q9UND3 350 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 ERVK-19Q9WJR5 959 aa21.55■■□□□ 1.04
CHFR-222ENST00000544093 SERTM1A2A2V5 107 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 ASNA1O43681 348 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 SLC19A2O60779 497 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 CPA3P15088 417 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 DEKP35659 375 aaKnown RBP21.54■■□□□ 1.04
CHFR-222ENST00000544093 GSTM5P46439 218 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 XKP51811 444 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 SLC18A2Q05940 514 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 IFFO1Q0D2I5 559 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 SLC48A1Q6P1K1 146 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 C16orf47Q6ZP98 133 aaPredicted RBP21.54■■□□□ 1.04
CHFR-222ENST00000544093 DGAT2L6Q6ZPD8 337 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 FRMD7Q6ZUT3 714 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 C9orf40Q8IXQ3 194 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 C16orf52Q8NHV5 167 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 CHTF18Q8WVB6 975 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 HBEGFQ99075 208 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 ROPN1BQ9BZX4 212 aaPredicted RBP21.54■■□□□ 1.04
CHFR-222ENST00000544093 CXorf21Q9HAI6 301 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 ROPN1Q9HAT0 212 aaPredicted RBP21.54■■□□□ 1.04
CHFR-222ENST00000544093 OXSMQ9NWU1 459 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 MKS1Q9NXB0 559 aa21.54■■□□□ 1.04
CHFR-222ENST00000544093 SUCOQ9UBS9 1254 aaKnown RBP21.54■■□□□ 1.04
CHFR-222ENST00000544093 TRGV8A0A0C4DH27 118 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 WASHC1A8K0Z3 465 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 TFECO14948 347 aaPredicted RBP21.53■■□□□ 1.04
CHFR-222ENST00000544093 RNF224P0DH78 156 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 CPMP14384 443 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 PORP16435 677 aaPredicted RBP21.53■■□□□ 1.04
CHFR-222ENST00000544093 CA7P43166 264 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 NAGLUP54802 743 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 SLC37A1P57057 533 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 ACSM2AQ08AH3 577 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 ASPHQ12797 758 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 TCHHL1Q5QJ38 904 aaPredicted RBP21.53■■□□□ 1.04
CHFR-222ENST00000544093 C1QL3Q5VWW1 255 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 ACSM2BQ68CK6 577 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 RGS9BPQ6ZS82 235 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 FJX1Q86VR8 437 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 AENQ8WTP8 325 aaKnown RBP21.53■■□□□ 1.04
CHFR-222ENST00000544093 CAVIN3Q969G5 261 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 ACPTQ9BZG2 426 aa21.53■■□□□ 1.04
CHFR-222ENST00000544093 TLDC2A0PJX2 215 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 ACOT7O00154 380 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 CSNK2A2P19784 350 aaPredicted RBP21.52■■□□□ 1.04
CHFR-222ENST00000544093 LIPMQ5VYY2 423 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 GK5Q6ZS86 529 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 MAMDC2Q7Z304 686 aaPredicted RBP21.52■■□□□ 1.04
CHFR-222ENST00000544093 SAMD14Q8IZD0 417 aaPredicted RBP21.52■■□□□ 1.04
CHFR-222ENST00000544093 OR7G1Q8NGA0 311 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 TM4SF18Q96CE8 201 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 SHCBP1LQ9BZQ2 653 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 WWTR1Q9GZV5 400 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 TSPAN10Q9H1Z9 355 aaPredicted RBP21.52■■□□□ 1.04
CHFR-222ENST00000544093 SACM1LQ9NTJ5 587 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 ZNF835Q9Y2P0 537 aa21.52■■□□□ 1.04
CHFR-222ENST00000544093 FOXO6A8MYZ6 492 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 HRKO00198 91 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 CRCPO75575 148 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 ATP1B1P05026 303 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 DRD2P14416 443 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 FUT7Q11130 342 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 EBPQ15125 230 aaKnown RBP21.51■■□□□ 1.03
CHFR-222ENST00000544093 GALNT18Q6P9A2 607 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 Q6ZPB1 254 aaPredicted RBP21.51■■□□□ 1.03
CHFR-222ENST00000544093 SPPL2CQ8IUH8 684 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 TAGAPQ8N103 731 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 C4orf33Q8N1A6 199 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 UCN3Q969E3 161 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 TP53INP1Q96A56 240 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 APOPT1Q96IL0 206 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 GAL3ST4Q96RP7 486 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 FAM173AQ9BQD7 235 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 SIRT5Q9NXA8 310 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 LGALS13Q9UHV8 139 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms