RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR52E4Q8NGH9 312 aa18.52■□□□□ 0.56
SUDS3-204ENST00000543473 NUS1Q96E22 293 aa18.52■□□□□ 0.56
SUDS3-204ENST00000543473 SPO11Q9Y5K1 396 aa18.52■□□□□ 0.56
SUDS3-204ENST00000543473 CLDN4O14493 209 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 SLC16A5O15375 505 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 SOCS5O75159 536 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 SOD2P04179 222 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 CSF2RAP15509 400 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 AHCYP23526 432 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 PYCR1P32322 319 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 OR3A3P47888 321 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 OR3A2P47893 321 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.558e-7■■■□□ 15.5
SUDS3-204ENST00000543473 GRK1Q15835 563 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 KLHL26Q53HC5 615 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 OR52N2Q8NGI0 321 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 GTF2H4Q92759 462 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 SARDHQ9UL12 918 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 MEMO1Q9Y316 297 aa18.52■□□□□ 0.55
SUDS3-204ENST00000543473 A0A1B0GTW7 788 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 RENP00797 406 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 IRF5Q13568 498 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 RGNQ15493 299 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 PROKR2Q8NFJ6 384 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 NMNAT1Q9HAN9 279 aaPredicted RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 COPZ2Q9P299 210 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 MBLAC1A4D2B0 266 aaPredicted RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 PSMD9O00233 223 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 TRAM1Q15629 374 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 FAM76BQ5HYJ3 339 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 BBS10Q8TAM1 723 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 SCAMP4Q969E2 229 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 ZNF300Q96RE9 604 aaPredicted RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 GLOD5A6NK44 160 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 DISC1C4P0D8 188 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 SCAMP1O15126 338 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 C1GALT1C1LP0DN25 315 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 ZNF823P16415 610 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 PFKLP17858 780 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 SERPINA11Q86U17 422 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 CMTM8Q8IZV2 173 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 Q8N9G6 341 aaPredicted RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 TSNAXQ99598 290 aaKnown RBP18.51■□□□□ 0.55
SUDS3-204ENST00000543473 INSL5Q9Y5Q6 135 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 NHSQ6T4R5 1651 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 PLATP00750 562 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 MPC1LP0DKB6 136 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 MAGEA12P43365 314 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 GCGRP47871 477 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 E2F1Q01094 437 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 EFR3AQ14156 821 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 ATAD3CQ5T2N8 411 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 CADM3Q8N126 398 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 UBXN10Q96LJ8 280 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 RAB11FIP5Q9BXF6 653 aa18.51■□□□□ 0.55
SUDS3-204ENST00000543473 NDUFS4O43181 175 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 CPZQ66K79 652 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ZNF227Q86WZ6 799 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 OR4K5Q8NGD3 323 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 BOCQ9BWV1 1114 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 RFPL3O75679 317 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 C22orf39Q6P5X5 142 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 SPATC1Q76KD6 591 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 C6orf120Q7Z4R8 191 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 OR2L3Q8NG85 312 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 R3HDMLQ9H3Y0 253 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ZNF670-ZNF695F2Z2N8 137 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 WRBO00258 174 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 GABARAPO95166 117 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ACVR1BP36896 505 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 WNT4P56705 351 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ULK3Q6PHR2 472 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 HMGN2P46Q86SG4 172 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 FUNDC1Q8IVP5 155 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 OR2L5Q8NG80 312 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 PLEKHA1Q9HB21 404 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 CREBL2O60519 120 aaPredicted RBP18.5■□□□□ 0.55
SUDS3-204ENST00000543473 RBBP9O75884 186 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ARHGEF15O94989 841 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 JUNBP17275 347 aaPredicted RBP18.5■□□□□ 0.55
SUDS3-204ENST00000543473 CLCNKAP51800 687 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 RAB8AP61006 207 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 UBE2Q1Q7Z7E8 422 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ARHGAP12Q8IWW6 846 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 IQCF1Q8N6M8 205 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 OR14C36Q8NHC7 312 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 HUS1BQ8NHY5 278 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 ARNT2Q9HBZ2 717 aa18.5■□□□□ 0.55
SUDS3-204ENST00000543473 LOC100509620A0A075B734 347 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 C13orf42A0A1B0GVH6 325 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 TEX46H3BTG2 121 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 NARSO43776 548 aaKnown RBP18.49■□□□□ 0.55
SUDS3-204ENST00000543473 DRD5P21918 477 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 CFL1P23528 166 aaKnown RBP18.49■□□□□ 0.55
SUDS3-204ENST00000543473 SHFQ7M4L6 423 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 OR8K5Q8NH50 307 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 STOML3Q8TAV4 291 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 RHBDF1Q96CC6 855 aa18.49■□□□□ 0.55
SUDS3-204ENST00000543473 COQ10AQ96MF6 247 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms