RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FAM90A15PP0C7V4 464 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 FAM90A14PP0C7W9 464 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 GFAPP14136 432 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 HGFP14210 728 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 PVRP15151 417 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ST6GAL1P15907 406 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 KRT4P19013 534 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 GRIA3P42263 894 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 TBPL1P62380 186 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ABATP80404 500 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 SHC2P98077 582 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ACY1Q03154 408 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 PRDX1Q06830 199 aaKnown RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 LCTLQ6UWM7 567 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ADCK2Q7Z695 626 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 CLEC14AQ86T13 490 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 LRRC56Q8IYG6 542 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 IQCKQ8N0W5 287 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 LSMEM2Q8N112 164 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 LILRA2Q8N149 483 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 DPP10Q8N608 796 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 NUP43Q8NFH3 380 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 OR2L3Q8NG85 312 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 OR2A1Q8NGT9 310 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 FLVCR1-AS1Q8TAF5 88 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 MZB1Q8WU39 189 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 PYCR2Q96C36 320 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 RHBDF1Q96CC6 855 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 NXPE2Q96DL1 559 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 SLC41A2Q96JW4 573 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 GPR78Q96P69 363 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ATOH8Q96SQ7 321 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 MRPL57Q9BQC6 102 aaKnown RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ZPBPQ9BS86 351 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 HAUS8Q9BT25 410 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 ACPTQ9BZG2 426 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 IQCGQ9H095 443 aaKnown RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 FANCEQ9HB96 536 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 RIC8BQ9NVN3 520 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 OCIAD1Q9NX40 245 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 SLC39A1Q9NY26 324 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 EURLQ9NYK6 297 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 NDUFAF4Q9P032 175 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 SEMA5BQ9P283 1151 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 LGALS13Q9UHV8 139 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 PTBP2Q9UKA9 531 aaKnown RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 TMCO1Q9UM00 188 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 WASF3Q9UPY6 502 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 BTRCQ9Y297 605 aa4.85□□□□□ -1.63
CLIP1-217ENST00000543205 GCN1Q92616 2671 aaKnown RBP4.85□□□□□ -1.63
CLIP1-217ENST00000543205 HELZ2Q9BYK8 2649 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 UNC79Q9P2D8 2635 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TRABD2BA6NFA1 517 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TARM1B6A8C7 271 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 H0YC42 278 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 MAP2K7O14733 419 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 POLR1CO15160 346 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 PSPNO60542 156 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CCNT2O60583 730 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 GLRA3O75311 464 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 STK16O75716 305 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 IPO13O94829 963 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 WDR47O94967 919 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TNFSF15O95150 251 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 MYZAPP0CAP1 466 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 FGF3P11487 239 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CCL4P13236 92 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 FOLR1P15328 257 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ITIH1P19827 911 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TAC1P20366 129 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 MAGP20916 626 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 HRH2P25021 359 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 PSMA4P25789 261 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 MST1P26927 711 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CRHR1P34998 444 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CAPZA2P47755 286 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ALDH18A1P54886 795 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 MC2RQ01718 297 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TUBB3Q13509 450 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 KCNAB1Q14722 419 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CASP8Q14790 479 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 C18orf21Q32NC0 220 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TECRLQ5HYJ1 363 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 DCAF12Q5T6F0 453 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 FIGLAQ6QHK4 219 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CEACAM20Q6UY09 585 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 CBLL1Q75N03 491 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 TRABD2AQ86V40 505 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 THOC6Q86W42 341 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 C17orf64Q86WR6 236 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ULK2Q8IYT8 1036 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 C4orf33Q8N1A6 199 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 D2HGDHQ8N465 521 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 SNX31Q8N9S9 440 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 PDPRQ8NCN5 879 aa4.84□□□□□ -1.63
CLIP1-217ENST00000543205 ABHD4Q8TB40 342 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms