RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 STON2Q8WXE9 905 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 MESP1Q9BRJ9 268 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 RNF32Q9H0A6 362 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 REEP4Q9H6H4 257 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF552Q9H707 407 aaPredicted RBP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 ATAD3AQ9NVI7 634 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 OR6C76A6NM76 312 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 LAMA5O15230 3695 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 ZFAND5O76080 213 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 KITP10721 976 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 NTSP30990 170 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 GPR143P51810 404 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 ID2Q02363 134 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 MFAP5Q13361 173 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 ABHD17BQ5VST6 288 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 IL23RQ5VWK5 629 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 FAM219BQ5XKK7 198 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 IGFL2Q6UWQ7 119 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 HSDL2Q6YN16 418 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 APCDD1LQ8NCL9 501 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 CEP70Q8NHQ1 597 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 CDC26Q8NHZ8 85 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 SLC2A12Q8TD20 617 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 ACTRT2Q8TDY3 377 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 PPCDCQ96CD2 204 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 SENP5Q96HI0 755 aaPredicted RBP17.51■□□□□ 0.39
VPS33A-205ENST00000541169 MAELQ96JY0 434 aaKnown RBP17.51■□□□□ 0.39
VPS33A-205ENST00000541169 ZNF681Q96N22 645 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 NUDT9Q9BW91 350 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 DEFB126Q9BYW3 111 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 CXorf21Q9HAI6 301 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 HEY2Q9UBP5 337 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 CFL2Q9Y281 166 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 USH1CQ9Y6N9 552 aa17.51■□□□□ 0.39
VPS33A-205ENST00000541169 MGAQ8IWI9 3026 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 A8MUA0 341 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 DDAH2O95865 285 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 JUNP05412 331 aaKnown RBP17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ITGAMP11215 1152 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 SOX11P35716 441 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 MAP4K2Q12851 820 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 PDE7AQ13946 482 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 MEP1AQ16819 746 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ASB18Q6ZVZ8 466 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ACAD11Q709F0 780 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 TICAM1Q8IUC6 712 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 LIX1Q8N485 282 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ZADH2Q8N4Q0 377 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 EXD3Q8N9H8 876 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ZFP28Q8NHY6 868 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 ZNF675Q8TD23 568 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 BRIX1Q8TDN6 353 aaKnown RBP17.5■□□□□ 0.39
VPS33A-205ENST00000541169 PSMF1Q92530 271 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 CNRIP1Q96F85 164 aaPredicted RBP17.5■□□□□ 0.39
VPS33A-205ENST00000541169 TSSK3Q96PN8 268 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 BBS4Q96RK4 519 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 OR8D2Q9GZM6 311 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 CCDC134Q9H6E4 229 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
VPS33A-205ENST00000541169 MED13Q9UHV7 2174 aa17.5■□□□□ 0.39
VPS33A-205ENST00000541169 LOC400499M0QZD8 3231 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 DYTNA2CJ06 578 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 SDHDO14521 159 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 FCHO1O14526 889 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 IGKV3-11P04433 115 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 TACR1P25103 407 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 CLDN8P56748 225 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 PSPHP78330 225 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 DPY19L1Q2PZI1 675 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 ACER2Q5QJU3 275 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 RPS19BP1Q86WX3 136 aaKnown RBP17.49■□□□□ 0.39
VPS33A-205ENST00000541169 NCLNQ969V3 563 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
VPS33A-205ENST00000541169 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
VPS33A-205ENST00000541169 EGLN2Q96KS0 407 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 ACSS1Q9NUB1 689 aaPredicted RBP17.49■□□□□ 0.39
VPS33A-205ENST00000541169 STMN3Q9NZ72 180 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 ATP6V1HQ9UI12 483 aa17.49■□□□□ 0.39
VPS33A-205ENST00000541169 TRBV11-1A0A0K0K1C0 115 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 MYO1GB0I1T2 1018 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 IDO1P14902 403 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 NT5EP21589 574 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 FEN1P39748 380 aaKnown RBP17.48■□□□□ 0.39
VPS33A-205ENST00000541169 CLNS1AP54105 237 aaKnown RBP17.48■□□□□ 0.39
VPS33A-205ENST00000541169 FUT7Q11130 342 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 ZNF267Q14586 743 aaPredicted RBP17.48■□□□□ 0.39
VPS33A-205ENST00000541169 PCSK4Q6UW60 755 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 EPGNQ6UW88 154 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 RNF111Q6ZNA4 994 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 SLC29A4Q7RTT9 530 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 CAMKMTQ7Z624 323 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 VWA5B2Q8N398 1253 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 HORMAD2Q8N7B1 307 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 NUBPLQ8TB37 319 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 ZNF721Q8TF20 911 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 SLC39A7Q92504 469 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 HAS2Q92819 552 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 PPWD1Q96BP3 646 aaKnown RBP17.48■□□□□ 0.39
VPS33A-205ENST00000541169 PPP1R36Q96LQ0 422 aa17.48■□□□□ 0.39
VPS33A-205ENST00000541169 C1orf50Q9BV19 199 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms