RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 GALNT12Q8IXK2 581 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 EID3Q8N140 333 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 CDYL2Q8N8U2 506 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GBP7Q8N8V2 638 aaPredicted RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 OR4K14Q8NGD5 310 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 UBLCP1Q8WVY7 318 aaPredicted RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 PPWD1Q96BP3 646 aaKnown RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 CCDC120Q96HB5 630 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 CNPPD1Q9BV87 410 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 WWTR1Q9GZV5 400 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 LIN28AQ9H9Z2 209 aaKnown RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 CXorf21Q9HAI6 301 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 FARSBQ9NSD9 589 aaKnown RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 VPS29Q9UBQ0 182 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 TBK1Q9UHD2 729 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 ERVK-19Q9WJR5 959 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 HRKO00198 91 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 PGRMC2O15173 223 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 CDH16O75309 829 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ULK1O75385 1050 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 WISP2O76076 250 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 NADKO95544 446 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 ESRRBO95718 433 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 SHBGP04278 402 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 MYL2P10916 166 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ABOP16442 354 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 AGAP20933 346 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 HMOX2P30519 316 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 CCT5P48643 541 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 GPR85P60893 370 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 FUT7Q11130 342 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ASPHQ12797 758 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ART3Q13508 389 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ZNF267Q14586 743 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 EBPQ15125 230 aaKnown RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 C3AR1Q16581 482 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ZNF791Q3KP31 576 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 CCDC153Q494R4 210 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 CMPK2Q5EBM0 449 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 SLC48A1Q6P1K1 146 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ZYG11AQ6WRX3 759 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 SH2D5Q6ZV89 423 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 SLC22A16Q86VW1 577 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 CHERPQ8IWX8 916 aaKnown RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 SLC34A3Q8N130 599 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ZNF808Q8N4W9 903 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 OR2M7Q8NG81 312 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 RDH11Q8TC12 318 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 METTL6Q8TCB7 284 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 ITLN2Q8WWU7 325 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 SPACA9Q96E40 222 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 FAM173AQ9BQD7 235 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 FAIM2Q9BWQ8 316 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 SACM1LQ9NTJ5 587 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 DEPPQ9NTK1 212 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 MCM8Q9UJA3 840 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 TINAGQ9UJW2 476 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 EMCNQ9ULC0 261 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 PCDHA9Q9Y5H5 950 aa10.69□□□□□ -0.7
RTN3-209ENST00000538995 KLF2Q9Y5W3 355 aaPredicted RBP10.69□□□□□ -0.7
RTN3-209ENST00000538995 SERTM1A2A2V5 107 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 WASHC1A8K0Z3 465 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 G3V2L1 256 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PRRG2O14669 202 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 HS6ST1O60243 411 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ZNF354AO60765 605 aaPredicted RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 GLSO94925 669 aaPredicted RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 PROCP04070 461 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 CLPSP04118 112 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 P04436 131 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ATP1B1P05026 303 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 FBXO45P0C2W1 286 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ESRRAP11474 423 aaPredicted RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 CPMP14384 443 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 KRT15P19012 456 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 CNR1P21554 472 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PTGER1P34995 402 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 CRHR1P34998 444 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 DCTP40126 519 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 GSTM5P46439 218 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 XKP51811 444 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 DNAJB13P59910 316 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 HYAL4Q2M3T9 481 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 SPIN4Q56A73 249 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ARHGAP11AQ6P4F7 1023 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PAOXQ6QHF9 649 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 LYPD8Q6UX82 237 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 TAGAPQ8N103 731 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 RIBC1Q8N443 379 aaPredicted RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 C1orf52Q8N6N3 182 aaKnown RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 ZNF441Q8N8Z8 693 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 C17orf47Q8NEP4 570 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 OR7G1Q8NGA0 311 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PAQR8Q8TEZ7 354 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 AGAP11Q8TF27 550 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PHF10Q8WUB8 498 aaKnown RBP10.68□□□□□ -0.7
RTN3-209ENST00000538995 CHTF18Q8WVB6 975 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms