RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PLAG1Q6DJT9 500 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 FAM3CQ92520 227 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 MGLLQ99685 303 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 PELI2Q9HAT8 420 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 FZD3Q9NPG1 666 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 FAM86C1Q9NVL1 165 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 NDOR1Q9UHB4 597 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 PNMA8CA0A1B0GUJ8 204 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ANKDD1BA6NHY2 528 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 PLPP1O14494 284 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 FFAR1O14842 300 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 LZTS3O60299 673 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 MFN2O95140 757 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 MED26O95402 600 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ADH5P11766 374 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 OSMP13725 252 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 TMED10P49755 219 aaKnown RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 SNRPGP62308 76 aaKnown RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 CD300CQ08708 224 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ILKQ13418 452 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ARHGAP19Q14CB8 494 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 KHDRBS2Q5VWX1 349 aaKnown RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 C11orf96Q7Z7L8 435 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 DSG4Q86SJ6 1040 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 SLC38A5Q8WUX1 472 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ARRDC3Q96B67 414 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 TM4SF18Q96CE8 201 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 Q96MT0 163 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 CHCHD6Q9BRQ6 235 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 CENPOQ9BU64 300 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 SLC25A19Q9HC21 320 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 POLE4Q9NR33 117 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 SLC6A14Q9UN76 642 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 MGAT4BQ9UQ53 548 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 ASF1AQ9Y294 204 aa13.79□□□□□ -0.2
CDCA3-207ENST00000538862 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
CDCA3-207ENST00000538862 CCRL2O00421 344 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CAPN5O15484 640 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PDPK1O15530 556 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TBX1O43435 398 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MMP20O60882 483 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 SNX4O95219 450 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PTTG1O95997 202 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CYP17A1P05093 508 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HSMCR30P0CW71 290 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ERGP11308 486 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 BSGP35613 385 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HSD17B2P37059 387 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 GSTM5P46439 218 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MAPK12P53778 367 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MANFP55145 182 aaKnown RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 LIM2P55344 173 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HEPACAMQ14CZ8 416 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 STEAP3Q658P3 488 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 NCCRP1Q6ZVX7 275 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 C17orf64Q86WR6 236 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MMP21Q8N119 569 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HORMAD2Q8N7B1 307 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 RASSF5Q8WWW0 418 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HPS1Q92902 700 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF764Q96H86 408 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 QRFPRQ96P65 431 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 IL17FQ96PD4 163 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 AIF1LQ9BQI0 150 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 SORBS1Q9BX66 1292 aaKnown RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 MS4A8Q9BY19 250 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 M0R129 80 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 HAT1O14929 419 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 TBX6O95947 436 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 BCHEP06276 602 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 ADRB3P13945 408 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 FUT4P22083 530 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CTHP32929 405 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 FRKP42685 505 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-207ENST00000538862 METAP1P53582 386 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CRISP3P54108 245 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 CYP4F2P78329 520 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 RHAGQ02094 409 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 FZD5Q13467 585 aa13.78□□□□□ -0.2
CDCA3-207ENST00000538862 RUNX3Q13761 415 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms