RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
RTN3-207ENST00000536011 GAL3ST4Q96RP7 486 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ERVK-6Q9BXR3 956 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 VPS11Q9H270 941 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 LDAHQ9H6V9 325 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 EXO5Q9H790 373 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 AHSPQ9NZD4 102 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ERVK-19Q9WJR5 959 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
RTN3-207ENST00000536011 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 A0A1B0GVC2 190 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 KRT38O76015 456 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 SLC35E2P0CK97 266 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 CNTFP26441 200 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 BSGP35613 385 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TMED10P49755 219 aaKnown RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 SERPINB9P50453 376 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 CCNG1P51959 295 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TLE4Q04727 773 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 PMPCAQ10713 525 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 FOXO1Q12778 655 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 IFT88Q13099 833 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 WHAMMP3Q1A5X7 153 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ZNF791Q3KP31 576 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 GXYLT1Q4G148 440 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TECRLQ5HYJ1 363 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 EMC4Q5J8M3 183 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TBCELQ5QJ74 424 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 WLSQ5T9L3 541 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 HLA-DQA1Q5Y7H0 255 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TTC19Q6DKK2 380 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 MRM1Q6IN84 353 aaKnown RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 FBXW8Q8N3Y1 598 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 RNF175Q8N4F7 328 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 MARVELD2Q8N4S9 558 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 PTGR2Q8N8N7 351 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 MYRIPQ8NFW9 859 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TREX2Q9BQ50 279 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 WWTR1Q9GZV5 400 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 MCCC2Q9HCC0 563 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ZFP64Q9NPA5 681 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 PNPLA3Q9NST1 481 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 NINJ2Q9NZG7 142 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ACAD8Q9UKU7 415 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 RNF11Q9Y3C5 154 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ASB4Q9Y574 426 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ANKRD17O75179 2603 aaKnown RBP12.11□□□□□ -0.47
RTN3-207ENST00000536011 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
RTN3-207ENST00000536011 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 POLQO75417 2590 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 TRGV5A0A0B4J1U4 118 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 ATP6AP2A0A1C7CYW4 349 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 HMX2A2RU54 273 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 FAM90A27PA6NNH2 459 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 STX16O14662 325 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 TP53I11O14683 189 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 TMPRSS11DO60235 418 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 GUCY1B2O75343 617 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 EEDO75530 441 aaKnown RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 ATP6AP2O75787 350 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 AIFM1O95831 613 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 FBXO45P0C2W1 286 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 COL6A2P12110 1019 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 GABRA1P14867 456 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 PIK3R1P27986 724 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 NRG3P56975 720 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 SLC37A1P57057 533 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 NUP107P57740 925 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 RPP38P78345 283 aaKnown RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 EBPQ15125 230 aaKnown RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 FRG2Q64ET8 278 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 GALNT12Q8IXK2 581 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 CLYBLQ8N0X4 340 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 C17orf53Q8N3J3 647 aaPredicted RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 LIX1Q8N485 282 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 MNS1Q8NEH6 495 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 OR5M9Q8NGP3 310 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 WDR20Q8TBZ3 569 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 SLC44A1Q8WWI5 657 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 ISL2Q96A47 359 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 GPR78Q96P69 363 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 FRG2BQ96QU4 278 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 LRRC1Q9BTT6 524 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 ZNF717Q9BY31 904 aaPredicted RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 FUT8Q9BYC5 575 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 ELOVL6Q9H5J4 265 aa12.1□□□□□ -0.47
RTN3-207ENST00000536011 ZNF703Q9H7S9 590 aaPredicted RBP12.1□□□□□ -0.47
RTN3-207ENST00000536011 NOL11Q9H8H0 719 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms