RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RAB36O95755 333 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 EPHX1P07099 455 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 HBQ1P09105 142 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 CYP2A6P11509 494 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-232ENST00000535094 KIR2DL3P43628 341 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 SLC6A12P48065 614 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 CRYBA2P53672 197 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 LSM11P83369 360 aaKnown RBP eCLIP15.12■□□□□ 0.01
MCF2L-232ENST00000535094 MAB21L1Q13394 359 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 E2F2Q14209 437 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 ZNF267Q14586 743 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-232ENST00000535094 INSL4Q14641 139 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 P2RY14Q15391 338 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 SEC23BQ15437 767 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 MPPE1Q53F39 396 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 PLEKHS1Q5SXH7 462 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 BCL2L15Q5TBC7 163 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 GDPD4Q6W3E5 623 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 C6orf120Q7Z4R8 191 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 CLIP3Q96DZ5 547 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 SRRQ9GZT4 340 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 EGLN3Q9H6Z9 239 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 EXTL2Q9UBQ6 330 aa15.12■□□□□ 0.01
MCF2L-232ENST00000535094 CPSF4LA6NMK7 179 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ZNF670-ZNF695F2Z2N8 137 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 C1SP09871 688 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 DDOSTP39656 456 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 GPR1P46091 355 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 DCDC1P59894 354 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 LASP1Q14847 261 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 SYPL1Q16563 259 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 FLYWCH1Q4VC44 716 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 SLC43A3Q8NBI5 491 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 LRRC20Q8TCA0 184 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 SDHCQ99643 169 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 CHIAQ9BZP6 476 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 C3orf14Q9HBI5 128 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 PDPK1O15530 556 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 LYRM1O43325 122 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 GPR37L1O60883 481 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 LEFTY1O75610 366 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ZDHHC11BP0C7U3 371 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 DDX5P17844 614 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 IMPA1P29218 277 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ETV5P41161 510 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ETV1P50549 477 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 GRHL2Q6ISB3 625 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 XKRXQ6PP77 449 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 CCDC149Q6ZUS6 474 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 SLC38A5Q8WUX1 472 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 BCL7CQ8WUZ0 217 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 RASSF5Q8WWW0 418 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 MACROD1Q9BQ69 325 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 CNOT2Q9NZN8 540 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 DOCK4Q8N1I0 1966 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 KCNE1BA0A087WTH5 132 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 WASHC1A8K0Z3 465 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 RNASET2O00584 256 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ADRA2AP08913 450 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ERP29P30040 261 aaKnown RBP15.11■□□□□ 0.01
MCF2L-232ENST00000535094 CDH11P55287 796 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 WASH2PQ6VEQ5 465 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 OR4F15Q8NGB8 312 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 SETD6Q8TBK2 473 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ZNF480Q8WV37 535 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 CXorf36Q9H7Y0 433 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 TAC3Q9UHF0 121 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 HCN2Q9UL51 889 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 ING4Q9UNL4 249 aa15.11■□□□□ 0.01
MCF2L-232ENST00000535094 LOC105369274A0A096LPK9 316 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 TSPAN4O14817 238 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 GCM2O75603 506 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-232ENST00000535094 PTPN2P17706 415 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 CBLP22681 906 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 SSR2P43308 183 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 LIM2P55344 173 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 GALK2Q01415 458 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 RBBP4Q09028 425 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 FAPQ12884 760 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 ZNF79Q15937 498 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 GGTA1PQ4G0N0 100 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 SAXO2Q658L1 398 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 MZT2AQ6P582 158 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 ARL9Q6T311 187 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 NPAS4Q8IUM7 802 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 HOMEZQ8IX15 550 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 OR4N4Q8N0Y3 316 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 BEST4Q8NFU0 473 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 CHAC2Q8WUX2 184 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 MAGEB10Q96LZ2 347 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-232ENST00000535094 ZDHHC4Q9NPG8 344 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 MGAT4BQ9UQ53 548 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 MYO16Q9Y6X6 1858 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 SPTBP11277 2137 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 HNRNPCL2B2RXH8 293 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 CYBAP13498 195 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 XCR1P46094 333 aa15.1■□□□□ 0.01
MCF2L-232ENST00000535094 RPL6Q02878 288 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms