RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HBQ1P09105 142 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 UMPSP11172 480 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 TCN1P20061 433 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF10P21506 573 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 HIST1H1TP22492 207 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 ATP5A1P25705 553 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 TIA1P31483 386 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 PLA2G16P53816 162 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 CDH15P55291 814 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 RAB8AP61006 207 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 SNRPNP63162 240 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 RAE1P78406 368 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF773Q6PK81 442 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 FKBP9P1Q75LS8 142 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 NUDT13Q86X67 352 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 FNDC5Q8NAU1 212 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 TEFMQ96QE5 360 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 SERINC2Q96SA4 455 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 PSD2Q9BQI7 771 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 DCUN1D5Q9BTE7 237 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 NDC1Q9BTX1 674 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 DDA1Q9BW61 102 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 APMAPQ9HDC9 416 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 SLC39A1Q9NY26 324 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 ACTR3BQ9P1U1 418 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 WBP11Q9Y2W2 641 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 NDUFAF1Q9Y375 327 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 FAM32AQ9Y421 112 aaKnown RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 A0A0A6YYD5 115 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 RTCAO00442 366 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 DLGAP1O14490 977 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 DSCR3O14972 297 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 CLOCKO15516 846 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 CNOT3O75175 753 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 EEDO75530 441 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 KLHL18O94889 574 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 NSA2O95478 260 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 SPTBP11277 2137 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 PRPS2P11908 318 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 MAPK1P28482 360 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ETV5P41161 510 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 SSR2P43308 183 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 TMED10P49755 219 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 STX1BP61266 288 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 SKP1P63208 163 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 BTN3A2P78410 334 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 NFATC3Q12968 1075 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 AGKQ53H12 422 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 TBCELQ5QJ74 424 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 MRM1Q6IN84 353 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 PWWP2BQ6NUJ5 590 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 CEACAM20Q6UY09 585 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF793Q6ZN11 406 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 USP51Q70EK9 711 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 CBR4Q8N4T8 237 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 DHRSXQ8N5I4 330 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ACOT4Q8N9L9 421 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ZCCHC10Q8TBK6 192 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 TSPEARQ8WU66 669 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 TAAR9Q96RI9 348 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ASPSCR1Q9BZE9 553 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 POLR1BQ9H9Y6 1135 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 ANKHQ9HCJ1 492 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 SMPD3Q9NY59 655 aaPredicted RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 EIF3LQ9Y262 564 aaKnown RBP11.61□□□□□ -0.55
SCARB1-204ENST00000535005 PCDHGA8Q9Y5G5 932 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 CFAP54Q96N23 3096 aa11.61□□□□□ -0.55
SCARB1-204ENST00000535005 H0YIG0 161 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PLOD2O00469 737 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PCDH7O60245 1069 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 TIPRLO75663 272 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 SCRG1O75711 98 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 CLPXO76031 633 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 SEC14L2O76054 403 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 TIAF1O95411 115 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ONECUT2O95948 504 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 BCL10O95999 233 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 KLK1P06870 262 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ALDOCP09972 364 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 JMJD7P0C870 316 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 BCKDHAP12694 445 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 CD1EP15812 388 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 JAK1P23458 1154 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 GSTM5P46439 218 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 MRPL19P49406 292 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 TRA2BP62995 288 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PMS2P3Q13401 168 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF846Q147U1 533 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 DEFB134Q4QY38 66 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 DCAF12Q5T6F0 453 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 AMER3Q8N944 861 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 FAM156AQ8NDB6 213 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PAPD5Q8NDF8 572 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms