RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	OR5M3	Q8NGP4	307 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR14A16	Q8NHC5	309 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	RHBDF1	Q96CC6	855 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	WDR34	Q96EX3	536 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	SMC6	Q96SB8	1091 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ALOXE3	Q9BYJ1	711 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	KCNK9	Q9NPC2	374 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	PPAN	Q9NQ55	473 aa	Known RBP	10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	CTNNAL1	Q9UBT7	734 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM215A	Q9Y5M1	114 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ANKDD1B	A6NHY2	528 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	HCN1	O60741	890 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	CTAG2	O75638	210 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	CD99	P14209	185 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SAT1	P21673	171 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	IST1	P53990	364 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	GNGT1	P63211	74 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	RNF4	P78317	190 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	FOLH1	Q04609	750 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TBL3	Q12788	808 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	FOXD4	Q12950	439 aa	Predicted RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	NAB1	Q13506	487 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SERTAD2	Q14140	314 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLBP	Q14493	270 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC10A1	Q14973	349 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	MPEG1	Q2M385	716 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZNF750	Q32MQ0	723 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	KBTBD12	Q3ZCT8	623 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TNFAIP8L3	Q5GJ75	292 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TRIM40	Q6P9F5	258 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TRMT10B	Q6PF06	316 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	OPN5	Q6U736	354 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	CYS1	Q717R9	158 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	VN1R5	Q7Z5H4	357 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	ADAMTSL2	Q86TH1	951 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	EXOC3L1	Q86VI1	746 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TMEM200A	Q86VY9	491 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZC3HC1	Q86WB0	502 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	TMEM251	Q8N6I4	163 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	PPM1N	Q8N819	430 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	CHDH	Q8NE62	594 aa	Predicted RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SVIP	Q8NHG7	77 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	MCMBP	Q9BTE3	642 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	ROGDI	Q9GZN7	287 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	REXO4	Q9GZR2	422 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	POPDC3	Q9HBV1	291 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	LYRM4	Q9HD34	91 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	PRDM7	Q9NQW5	492 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SACM1L	Q9NTJ5	587 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	NKIRAS1	Q9NYS0	192 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	MOCS1	Q9NZB8	636 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC17A6	Q9P2U8	582 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	L3MBTL1	Q9Y468	752 aa		10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	INTS1	Q8N201	2190 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647	PHF3	Q92576	2039 aa	Known RBP	10.67	□□□□□ -0.7
CTNND1-238	ENST00000534647		A0A0G2JMM0	328 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647		A0A0G2JNJ9	132 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647		A0A1W2PPB8	328 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647		A0A1W2PRS3	328 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM166B	A8MTA8	275 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	KIR3DP1	A8MWS1	328 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	WWP2	O00308	870 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	WDR47	O94967	919 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZWINT	O95229	277 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	IFNA16	P05015	189 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	GABRA1	P14867	456 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	MDH1	P40925	334 aa	Known RBP	10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	GDF5	P43026	501 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	MAGEA5	P43359	124 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	SERPINB9	P50453	376 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	PLA2G16	P53816	162 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	DLX5	P56178	289 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TAS2R39	P59534	338 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TGM3	Q08188	693 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	MGAT5	Q09328	741 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	MYBPH	Q13203	477 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	BIK	Q13323	160 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	E2F2	Q14209	437 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TGFBI	Q15582	683 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	PIGG	Q5H8A4	983 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TGIF2LY	Q8IUE0	185 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TCAIM	Q8N3R3	496 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM47B	Q8NA70	645 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	SRFBP1	Q8NEF9	429 aa	Known RBP	10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR5M9	Q8NGP3	310 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR10Q1	Q8NGQ4	319 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC44A1	Q8WWI5	657 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	SARAF	Q96BY9	339 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	PTCD3	Q96EY7	689 aa	Known RBP	10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	VPS39	Q96JC1	886 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	EGFL8	Q99944	293 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	GRIP2	Q9C0E4	1043 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	LIN28A	Q9H9Z2	209 aa	Known RBP	10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	SH2D2A	Q9NP31	389 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	TXNDC16	Q9P2K2	825 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647		Q9UFV3	132 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZNF180	Q9UJW8	692 aa		10.66	□□□□□ -0.7
CTNND1-238	ENST00000534647	PSAT1	Q9Y617	370 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms