RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 Q6ZPB1 254 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 GK5Q6ZS86 529 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SLC29A4Q7RTT9 530 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PAGE2Q7Z2X7 111 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 FGD2Q7Z6J4 655 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 C9orf40Q8IXQ3 194 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 CDYL2Q8N8U2 506 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ZFP62Q8NB50 900 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 LRRN4CLQ8ND94 238 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 FAM13CQ8NE31 585 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 C16orf52Q8NHV5 167 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SLC22A8Q8TCC7 542 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF483Q8TF39 744 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 FBXL20Q96IG2 436 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PKNOX2Q96KN3 472 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PHF12Q96QT6 1004 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SACM1LQ9NTJ5 587 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PSD3Q9NYI0 1048 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PSMC3IPQ9P2W1 217 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SNX6Q9UNH7 406 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 MEMO1Q9Y316 297 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ARHGAP21Q5T5U3 1957 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 HNRNPRO43390 633 aaKnown RBP9.65□□□□□ -0.86
CAPN1-225ENST00000533704 DLX3O60479 287 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 LRATO95237 230 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 ESRRBO95718 433 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 IGKV3-11P04433 115 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 PYGBP11216 843 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 CNR1P21554 472 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 NT5EP21589 574 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 HTR1EP28566 365 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 HMOX2P30519 316 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 SSTR4P31391 388 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 PIGAP37287 484 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 ALDH9A1P49189 494 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 NR0B1P51843 470 aaKnown RBP9.65□□□□□ -0.86
CAPN1-225ENST00000533704 GGTA1PQ4G0N0 100 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 UNC50Q53HI1 259 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 PIGGQ5H8A4 983 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TCHHL1Q5QJ38 904 aaPredicted RBP9.65□□□□□ -0.86
CAPN1-225ENST00000533704 NDUFAF5Q5TEU4 345 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 PRAMEF20Q5VT98 475 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 HLA-DQA1Q5Y7H0 255 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TIFABQ6ZNK6 161 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 GPRIN3Q6ZVF9 776 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 COMMD6Q7Z4G1 85 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 SLC22A16Q86VW1 577 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 DOLPP1Q86YN1 238 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 CHERPQ8IWX8 916 aaKnown RBP9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 OR5M3Q8NGP4 307 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 NUBPLQ8TB37 319 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 UBLCP1Q8WVY7 318 aaPredicted RBP9.65□□□□□ -0.86
CAPN1-225ENST00000533704 SGCZQ96LD1 299 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TMEM237Q96Q45 408 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 FAM173AQ9BQD7 235 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TTTY12Q9BZ98 90 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 WWTR1Q9GZV5 400 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 TRPS1Q9UHF7 1281 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 PPT2Q9UMR5 302 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 ENTPD4Q9Y227 616 aa9.65□□□□□ -0.86
CAPN1-225ENST00000533704 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.87
CAPN1-225ENST00000533704 ATP6AP2A0A1C7CYW4 349 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 FOXO6A8MYZ6 492 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 NPIPA2E9PIF3 369 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 NPIPA3F8WFD2 350 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 MANBAO00462 879 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 GUCY1B2O75343 617 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 ERAL1O75616 437 aaKnown RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 ATP6AP2O75787 350 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 NADKO95544 446 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KRT6AP02538 564 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KRT6BP04259 564 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SLC35E2P0CK97 266 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 ATP5F1P24539 256 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 HSD17B3P37058 310 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 MAGEA5P43359 124 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SLCO1A2P46721 670 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KRT6CP48668 564 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 XKP51811 444 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KCNJ2P63252 427 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 RASA2Q15283 850 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SPRED3Q2MJR0 410 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF678Q5SXM1 525 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 C10orf62Q5T681 223 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SLC22A10Q63ZE4 541 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 XKRXQ6PP77 449 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 PAOXQ6QHF9 649 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 TMEM64Q6YI46 380 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 BNC2Q6ZN30 1099 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 GALNT12Q8IXK2 581 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SRRM1Q8IYB3 904 aaKnown RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 MMP21Q8N119 569 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SLC34A3Q8N130 599 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 EID3Q8N140 333 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms